RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 SSX9Q7RTT3 188 aa5.45□□□□□ -1.54
CPS1-202ENST00000417946 C9orf62Q8N4C0 152 aa5.45□□□□□ -1.54
CPS1-202ENST00000417946 OR1S1Q8NH92 325 aa5.45□□□□□ -1.54
CPS1-202ENST00000417946 GRPEL2Q8TAA5 225 aa5.45□□□□□ -1.54
CPS1-202ENST00000417946 TMEM167AQ8TBQ9 72 aa5.45□□□□□ -1.54
CPS1-202ENST00000417946 HARBI1Q96MB7 349 aa5.45□□□□□ -1.54
CPS1-202ENST00000417946 ZNF48Q96MX3 618 aaPredicted RBP5.45□□□□□ -1.54
CPS1-202ENST00000417946 SMR3AQ99954 134 aa5.45□□□□□ -1.54
CPS1-202ENST00000417946 QTRT1Q9BXR0 403 aaKnown RBP5.45□□□□□ -1.54
CPS1-202ENST00000417946 MEGF9Q9H1U4 602 aa5.45□□□□□ -1.54
CPS1-202ENST00000417946 BET1LQ9NYM9 111 aa5.45□□□□□ -1.54
CPS1-202ENST00000417946 MBD2Q9UBB5 411 aa5.45□□□□□ -1.54
CPS1-202ENST00000417946 HSPB7Q9UBY9 170 aa5.45□□□□□ -1.54
CPS1-202ENST00000417946 FN1P02751 2386 aaKnown RBP5.45□□□□□ -1.54
CPS1-202ENST00000417946 NSD1Q96L73 2696 aaPredicted RBP5.45□□□□□ -1.54
CPS1-202ENST00000417946 RNF222A6NCQ9 220 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 E7EUB6 86 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 H7C2Y5 167 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 ST8SIA3O43173 380 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 KCNAB3O43448 404 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 SLC25A17O43808 307 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 NXPH3O95157 252 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 SLC25A4P12235 298 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 CXCL2P19875 107 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 PSMB6P28072 239 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 VDAC2P45880 294 aaPredicted RBP5.44□□□□□ -1.54
CPS1-202ENST00000417946 POLR2GP62487 172 aaKnown RBP eCLIP5.44□□□□□ -1.54
CPS1-202ENST00000417946 SUMO1P63165 101 aaKnown RBP5.44□□□□□ -1.54
CPS1-202ENST00000417946 PRSS8Q16651 343 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 DEFB112Q30KQ8 113 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 LRRC37A5PQ49AS3 106 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 C10orf55Q5SWW7 151 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 GPR157Q5UAW9 335 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 CCDC144NLQ6NUI1 221 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 PRSS54Q6PEW0 395 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 IL17RELQ6ZVW7 336 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 H2BFWTQ7Z2G1 175 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 NOXA1Q86UR1 476 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 ZNF429Q86V71 674 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 NPBQ8NG41 125 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 OR4C13Q8NGP0 309 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 TMEM170AQ8WVE7 144 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 FLYWCH2Q96CP2 140 aaKnown RBP5.44□□□□□ -1.54
CPS1-202ENST00000417946 BSCL2Q96G97 398 aaPredicted RBP5.44□□□□□ -1.54
CPS1-202ENST00000417946 SPIN2AQ99865 258 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 SPIN2BQ9BPZ2 258 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 PDCD10Q9BUL8 212 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 MAGT1Q9H0U3 335 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 PRDM13Q9H4Q3 707 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 ZNF430Q9H8G1 570 aaPredicted RBP5.44□□□□□ -1.54
CPS1-202ENST00000417946 TMEM14BQ9NUH8 114 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 GSKIPQ9P0R6 139 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 FOXA2Q9Y261 457 aaPredicted RBP5.44□□□□□ -1.54
CPS1-202ENST00000417946 POMT1Q9Y6A1 747 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 SVEP1Q4LDE5 3571 aa5.44□□□□□ -1.54
CPS1-202ENST00000417946 MAST4O15021 2626 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 IGSF23A1L1A6 192 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 A6NDX4 124 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 FCN1O00602 326 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 SHOXO15266 292 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 CHST1O43916 411 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 DEDDO75618 318 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 SPDEFO95238 335 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 MOSP00540 346 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 HRASP01112 189 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 AMY1AP04745 511 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 FGF2P09038 288 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 CD99P14209 185 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 LGALS7P47929 136 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 ARHGDIBP52566 201 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 LGALS4P56470 323 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 S100A10P60903 97 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 ERVK-16P61578 105 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 RPS16P62249 146 aaKnown RBP5.43□□□□□ -1.54
CPS1-202ENST00000417946 NDPQ00604 133 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 TNFRSF9Q07011 255 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 HNF4GQ14541 408 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 ZFP69Q49AA0 526 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 SPINK9Q5DT21 86 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 TMEM65Q6PI78 240 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 HAPLN4Q86UW8 402 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 Q8N9W7 124 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 TEX45Q8NA69 505 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 OR4A5Q8NH83 315 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 PPP1R14BQ96C90 147 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 FANCD2OSQ96PS1 177 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 OR4C12Q96R67 309 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 RNF5Q99942 180 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 FBXL15Q9H469 300 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 RBKSQ9H477 322 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 TMEM160Q9NX00 188 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 NUP50Q9UKX7 468 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 TNFSF18Q9UNG2 199 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 TCF19Q9Y242 345 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 SIGLEC9Q9Y336 463 aa5.43□□□□□ -1.54
CPS1-202ENST00000417946 FXYD6-FXYD2A0A087WZ82 144 aa5.42□□□□□ -1.54
CPS1-202ENST00000417946 TEX50A0A1B0GTY4 177 aa5.42□□□□□ -1.54
CPS1-202ENST00000417946 HMSDA8MTL9 139 aa5.42□□□□□ -1.54
CPS1-202ENST00000417946 TEX22C9J3V5 150 aa5.42□□□□□ -1.54
CPS1-202ENST00000417946 FAM90A26D6RGX4 464 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms