RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 PDLIM4P50479 330 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 LRBAP50851 2863 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 DVL1P1P54792 670 aaPredicted RBP13.59□□□□□ -0.23
SSBP3-205ENST00000417664 ARF6P62330 175 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 DLK1P80370 383 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 TUSC1Q2TAM9 212 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 PNKDQ8N490 385 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 SLC24A4Q8NFF2 622 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 OR1L8Q8NGR8 309 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 RSG1Q9BU20 258 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 COMMD5Q9GZQ3 224 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 NARFLQ9H6Q4 476 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 FBXO7Q9Y3I1 522 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 TEX50A0A1B0GTY4 177 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 FNDC10F2Z333 226 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 IGLV2-23P01705 113 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 MBP02144 154 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 CD5P06127 495 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 H2AFB1P0C5Y9 115 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 COX7A1P24310 79 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 NPY1RP25929 384 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 HTR1DP28221 377 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 CD1BP29016 333 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 TEX45Q8NA69 505 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 NARS2Q96I59 477 aaKnown RBP13.58□□□□□ -0.24
SSBP3-205ENST00000417664 CCL19Q99731 98 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 PBDC1Q9BVG4 233 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 SMDT1Q9H4I9 107 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 DPM3Q9P2X0 92 aa13.58□□□□□ -0.24
SSBP3-205ENST00000417664 TRAV1-1A0A0B4J248 108 aa13.57□□□□□ -0.24
SSBP3-205ENST00000417664 A0A1B0GW64 132 aa13.57□□□□□ -0.24
SSBP3-205ENST00000417664 A0A1W2PN81 502 aa13.57□□□□□ -0.24
SSBP3-205ENST00000417664 PRSS46E5RG02 174 aa13.57□□□□□ -0.24
SSBP3-205ENST00000417664 C17orf112F2Z3M2 114 aa13.57□□□□□ -0.24
SSBP3-205ENST00000417664 CHRNA7P36544 502 aa13.57□□□□□ -0.24
SSBP3-205ENST00000417664 ZNF709Q8N972 641 aa13.57□□□□□ -0.24
SSBP3-205ENST00000417664 NDUFA4L2Q9NRX3 87 aa13.57□□□□□ -0.24
SSBP3-205ENST00000417664 TET2Q6N021 2002 aaPredicted RBP13.57□□□□□ -0.24
SSBP3-205ENST00000417664 RNASEK-C17orf49H0YIS7 233 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 RRHO14718 337 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 IFNA4P05014 189 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 FGF7P21781 194 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 BPESC1Q9GZL8 116 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 TREM1Q9NP99 234 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 WDR83OSQ9Y284 106 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 RFNGQ9Y644 331 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 ODF3BA8MYP8 253 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 NDUFS8O00217 210 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 IGHV4-39P01824 125 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 PEA15Q15121 130 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 BSXQ3C1V8 233 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 TMEM41BQ5BJD5 291 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 TPTE2P1Q5T6R2 138 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 MOB3BQ86TA1 216 aa13.56□□□□□ -0.24
SSBP3-205ENST00000417664 RBMXL1Q96E39 390 aaKnown RBP13.56□□□□□ -0.24
SSBP3-205ENST00000417664 OOSP1A8MZH6 123 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 FOXH1O75593 365 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 MAS1LP35410 378 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 LMO4P61968 165 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 ERHP84090 104 aaKnown RBP13.55□□□□□ -0.24
SSBP3-205ENST00000417664 PAX2Q02962 417 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 C2orf83Q53S99 150 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 SP5Q6BEB4 398 aaPredicted RBP13.55□□□□□ -0.24
SSBP3-205ENST00000417664 MRPL41Q8IXM3 137 aaKnown RBP13.55□□□□□ -0.24
SSBP3-205ENST00000417664 TMEM170AQ8WVE7 144 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 HINT2Q9BX68 163 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 SEC11CQ9BY50 192 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 NPCDR1Q9BY65 106 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 SIRT7Q9NRC8 400 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 RPRMQ9NS64 109 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 KIAA1456Q9P272 454 aa13.55□□□□□ -0.24
SSBP3-205ENST00000417664 IGHV2-70DA0A0C4DH43 119 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 AGPAT2O15120 278 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 CA2P00918 260 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 RNF224P0DH78 156 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 ZFP36P26651 326 aaKnown RBP13.54□□□□□ -0.24
SSBP3-205ENST00000417664 DLX1P56177 255 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 GUK1Q16774 197 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 C10orf91Q5T1B1 145 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 MINOS1Q5TGZ0 78 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 MMD2Q8IY49 270 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 CLDND2Q8NHS1 167 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 MBD3L1Q8WWY6 194 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 NPVFQ9HCQ7 196 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 POLR3KQ9Y2Y1 108 aaPredicted RBP13.54□□□□□ -0.24
SSBP3-205ENST00000417664 MINOS1-NBL1R4GNA1 71 aa13.54□□□□□ -0.24
SSBP3-205ENST00000417664 A0A1W2PPI3 338 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 SLC25A17O43808 307 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 SRSF3P84103 164 aaKnown RBP13.53□□□□□ -0.24
SSBP3-205ENST00000417664 HABP2Q14520 560 aaPredicted RBP13.53□□□□□ -0.24
SSBP3-205ENST00000417664 HCP5Q6MZN7 132 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 CCDC144NLQ6NUI1 221 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 SPSB3Q6PJ21 355 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 SFT2D1Q8WV19 159 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 PIMREGQ9BSJ6 248 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 ZNF430Q9H8G1 570 aaPredicted RBP13.53□□□□□ -0.24
SSBP3-205ENST00000417664 KCNIP2Q9NS61 270 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 CARHSP1Q9Y2V2 147 aaKnown RBP13.53□□□□□ -0.24
SSBP3-205ENST00000417664 APOC3P02656 99 aa13.53□□□□□ -0.24
SSBP3-205ENST00000417664 CRYGBP07316 175 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms