RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 FOXC2Q99958 501 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 CITED1Q99966 193 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 KLF12Q9Y4X4 402 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 KIAA1217Q5T5P2 1943 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 TRBV5-7A0A0A0MS05 114 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 TRAV21A0A0B4J279 112 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 DUSP15Q9H1R2 295 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-203ENST00000412145 MYO7AQ13402 2215 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 IGHV5-51A0A0C4DH38 117 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 C1QTNF9P0C862 333 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 BIVMQ86UB2 503 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 OR5AN1Q8NGI8 311 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 ZNF721Q8TF20 911 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 NEU4Q8WWR8 484 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-203ENST00000412145 PLA2G3Q9NZ20 509 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 TDRD15B5MCY1 1934 aaKnown RBP6.32□□□□□ -1.4
PTPN3-203ENST00000412145 THY1P04216 161 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 ZNF79Q15937 498 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 TOMM40O96008 361 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 FAM74A4Q5TZK3 123 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 VGLL1Q99990 258 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 PTPRZ1P23471 2315 aaPredicted RBP6.31□□□□□ -1.4
PTPN3-203ENST00000412145 LINC00305Q7Z4B0 112 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 DLX4Q92988 240 aaPredicted RBP6.31□□□□□ -1.4
PTPN3-203ENST00000412145 CXCL2P19875 107 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 IL11P20809 199 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 CRYBB3P26998 211 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 CCL4L1Q8NHW4 92 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 TMEM170AQ8WVE7 144 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 PLPPR2Q96GM1 343 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 FZR1Q9UM11 496 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 J3KRW8 73 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 NBEAP1P0C6P0 100 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 EGR1P18146 543 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 P2RY4P51582 365 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 FBLN7Q53RD9 439 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 C8orf82Q6P1X6 216 aaPredicted RBP6.31□□□□□ -1.4
PTPN3-203ENST00000412145 ERG28Q9UKR5 140 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 FAM186AA6NE01 2351 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 ITGB4P16144 1822 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 LTBP4Q8N2S1 1624 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 LOC105371242A0A075B767 164 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 PPIAL4CA0A0B4J2A2 164 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 PPIAL4GP0DN37 164 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 WFDC3Q8IUB2 231 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 TMEM229AB2RXF0 380 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 SSTR5P35346 364 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 C1QL4Q86Z23 238 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 FAM181AQ8N9Y4 354 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 DUX3Q96PT4 197 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 PLA2G2FQ9BZM2 168 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 IFI27L2Q9H2X8 130 aa6.31□□□□□ -1.4
PTPN3-203ENST00000412145 MRPL20Q9BYC9 149 aaKnown RBP6.3□□□□□ -1.4
PTPN3-203ENST00000412145 FABP5P3A8MUU1 101 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 IQCF6A8MYZ5 107 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 OVOL1O14753 267 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 SPINT1O43278 529 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 KLF4O43474 513 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 C1orf53Q5VUE5 145 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 SPTA1P02549 2419 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 A0A1W2PRE2 83 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 WDR82Q6UXN9 313 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 TEX45Q8NA69 505 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 TNFRSF14Q92956 283 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 ZNF479Q96JC4 524 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 RALGAPA1Q6GYQ0 2036 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 TRAV24A0A0B4J272 114 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 EFNB1P98172 346 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 TMEM187Q14656 261 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 GUSBP11Q6P575 273 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 LINC01555Q8NAE3 123 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 OR5P3Q8WZ94 311 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 TTTY12Q9BZ98 90 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 SCN1AP35498 2009 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 NTN1O95631 604 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 DUTP33316 252 aaKnown RBP6.3□□□□□ -1.4
PTPN3-203ENST00000412145 CCL20P78556 96 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 SCN7AQ01118 1682 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 DMRTA1Q5VZB9 504 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 ZNF318Q5VUA4 2279 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 CCL21O00585 134 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 IGKCP01834 107 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 RBMY1FQ15415 496 aaKnown RBP6.3□□□□□ -1.4
PTPN3-203ENST00000412145 LY96Q9Y6Y9 160 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 A0A1B0GW64 132 aa6.3□□□□□ -1.4
PTPN3-203ENST00000412145 MED19A0JLT2 244 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-203ENST00000412145 A8MXK9 166 aa6.29□□□□□ -1.4
PTPN3-203ENST00000412145 H3BQ85 93 aa6.29□□□□□ -1.4
PTPN3-203ENST00000412145 VSIG10L2P0DP72 767 aa6.29□□□□□ -1.4
PTPN3-203ENST00000412145 COL9A1P20849 921 aa6.29□□□□□ -1.4
PTPN3-203ENST00000412145 CD69Q07108 199 aa6.29□□□□□ -1.4
PTPN3-203ENST00000412145 FXYD3Q14802 87 aa6.29□□□□□ -1.4
PTPN3-203ENST00000412145 SLC25A47Q6Q0C1 308 aa6.29□□□□□ -1.4
PTPN3-203ENST00000412145 RCC1LQ96I51 464 aaKnown RBP6.29□□□□□ -1.4
PTPN3-203ENST00000412145 ZNF703Q9H7S9 590 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-203ENST00000412145 JPT2Q9H910 190 aa6.29□□□□□ -1.4
PTPN3-203ENST00000412145 SNRNP200O75643 2136 aaKnown RBP6.29□□□□□ -1.4
PTPN3-203ENST00000412145 H0YL77 283 aa6.29□□□□□ -1.4
PTPN3-203ENST00000412145 CISD3P0C7P0 127 aa6.29□□□□□ -1.4
PTPN3-203ENST00000412145 RUNX1Q01196 453 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms