RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 NIT1Q86X76 327 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 CALHM1Q8IU99 346 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 SAXO1Q8IYX7 474 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 DEFB125Q8N687 156 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 CSNK1A1LQ8N752 337 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 ZNF676Q8N7Q3 588 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 LRRC75AQ8NAA5 344 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 OR4C5Q8NGB2 326 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 OR4P4Q8NGL7 312 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 OR2T10Q8NGZ9 312 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 RFESDQ8TAC1 157 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 FAM213BQ8TBF2 198 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 EMG1Q92979 244 aaKnown RBP1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 APH1AQ96BI3 265 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 REEP6Q96HR9 211 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 ABHD14BQ96IU4 210 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 BTF3L4Q96K17 158 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 C1orf147Q96MC9 270 aaPredicted RBP1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 ZNF681Q96N22 645 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 SIGLEC12Q96PQ1 595 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 AIF1LQ9BQI0 150 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 VAMP8Q9BV40 100 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 AICDAQ9GZX7 198 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 PARP12Q9H0J9 701 aaKnown RBP1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 LPAR5Q9H1C0 372 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 MANBALQ9NQG1 85 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 TMEM38BQ9NVV0 291 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 KLHL28Q9NXS3 571 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 BET1LQ9NYM9 111 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 AHSPQ9NZD4 102 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 CRLS1Q9UJA2 301 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 ZNF443Q9Y2A4 671 aaPredicted RBP1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 RBM7Q9Y580 266 aaKnown RBP1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 NUP210LQ5VU65 1888 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 HELZP42694 1942 aaKnown RBP1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 DENND4CQ5VZ89 1909 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 ANAPC1Q9H1A4 1944 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 COL4A2P08572 1712 aa1.85□□□□□ -2.11
HMGB3P2-201ENST00000411913 FRMPD3Q5JV73 1810 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 NUP210Q8TEM1 1887 aaPredicted RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 KIF26AQ9ULI4 1882 aaPredicted RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 CACNA1GO43497 2377 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 PLXNB3Q9ULL4 1909 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 TNS1Q9HBL0 1735 aaKnown RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 TRAV9-1A0A075B6T8 112 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 TRAV27A0A087WT01 109 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 A0A1B0GUS0 222 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 A0A1B0GV72 72 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 LOC102725191A0A1B0GVB3 256 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 GJE1A6NN92 205 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 OR11H12B2RN74 326 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 G3V3Y1 287 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 H0YJW9 148 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 TRAPPC2LH3BP13 241 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 K7EQS6 105 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 SAP18O00422 153 aaKnown RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 FCN1O00602 326 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 CD5LO43866 347 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 NPIPB7O75200 414 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 NDUFB2O95178 105 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 KLF8O95600 359 aaPredicted RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 CDS2O95674 445 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 HLA-DRB1P01911 266 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 PRB2P02812 416 aaPredicted RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 BGLAPP02818 100 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 CATP04040 527 aaKnown RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 DBIP07108 87 aaKnown RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 OR10J4P0C629 311 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 LINC00869P0C866 280 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 MSR1P21757 451 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 HNRNPA2B1P22626 353 aaKnown RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 IL3RAP26951 378 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 GALR1P47211 349 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 OR1D4P47884 311 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 NPBWR2P48146 333 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 REG1BP48304 166 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 PRLHRP49683 370 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 HNRNPA3P51991 378 aaKnown RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 CRYBA4P53673 196 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 CLDN6P56747 220 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 S100A10P60903 97 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 TBPL1P62380 186 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 RHOBP62745 196 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 RPL23AP62750 156 aaKnown RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 EWSR1Q01844 656 aaKnown RBP eCLIP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 BAXQ07812 192 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 SLAQ13239 276 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 EIF3IQ13347 325 aaKnown RBP1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 ZNF266Q14584 549 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 MSMO1Q15800 293 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 ZNF726P1Q15940 193 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 BATFQ16520 125 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 TMEM249Q2WGJ8 235 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 SPATA45Q537H7 98 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 EIPR1Q53HC9 387 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 GLYATL3Q5SZD4 288 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 FHL5Q5TD97 284 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 SAMD13Q5VXD3 122 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 RAET1LQ5VY80 246 aa1.84□□□□□ -2.11
HMGB3P2-201ENST00000411913 DNM1P34Q6PK57 102 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms