RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 MYOD1P15172 320 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 DEFA5Q01523 94 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 TERB2Q8NHR7 220 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 DCUN1D4Q92564 292 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 USMG5Q96IX5 58 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 SLC2A9Q9NRM0 540 aa13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 AURKAIP1Q9NWT8 199 aaPredicted RBP13.86□□□□□ -0.19
PDLIM2-206ENST00000409141 SEC14L6B5MCN3 397 aa13.85□□□□□ -0.19
PDLIM2-206ENST00000409141 ZNF701M0R085 212 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-206ENST00000409141 PRH1P02810 166 aa13.85□□□□□ -0.19
PDLIM2-206ENST00000409141 SLURP1P55000 103 aa13.85□□□□□ -0.19
PDLIM2-206ENST00000409141 KRTAP10-11P60412 298 aa13.85□□□□□ -0.19
PDLIM2-206ENST00000409141 MEF2DQ14814 521 aa13.85□□□□□ -0.19
PDLIM2-206ENST00000409141 C9orf66Q5T8R8 295 aa13.85□□□□□ -0.19
PDLIM2-206ENST00000409141 ZNF486Q96H40 463 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-206ENST00000409141 SOSTQ9BQB4 213 aa13.85□□□□□ -0.19
PDLIM2-206ENST00000409141 COMMD5Q9GZQ3 224 aa13.85□□□□□ -0.19
PDLIM2-206ENST00000409141 A0A1B0GW64 132 aa13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 ANKRD34BA5PLL1 514 aa13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 OVOL1O14753 267 aa13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 GSTZ1O43708 216 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 PI3P19957 117 aa13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 S100A5P33763 92 aa13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 G6PCP35575 357 aa13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 PPP5CP53041 499 aa13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 EGFEM1PQ0D2K5 195 aa13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 FAAP20Q6NZ36 180 aa13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 ZFAND1Q8TCF1 268 aa13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 DLX4Q92988 240 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 RANGRFQ9HD47 186 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 FAM212BQ9NTI7 297 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 ZNF257Q9Y2Q1 563 aa13.84□□□□□ -0.19
PDLIM2-206ENST00000409141 NPIPB5A8MRT5 1133 aa13.83□□□□□ -0.2
PDLIM2-206ENST00000409141 DISC1C4P0D8 188 aa13.83□□□□□ -0.2
PDLIM2-206ENST00000409141 RBMXL2O75526 392 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-206ENST00000409141 AKAIN1P0CW23 69 aa13.83□□□□□ -0.2
PDLIM2-206ENST00000409141 AREGP15514 252 aa13.83□□□□□ -0.2
PDLIM2-206ENST00000409141 OR2B8PP59922 312 aa13.83□□□□□ -0.2
PDLIM2-206ENST00000409141 RND3P61587 244 aa13.83□□□□□ -0.2
PDLIM2-206ENST00000409141 RHOGP84095 191 aa13.83□□□□□ -0.2
PDLIM2-206ENST00000409141 ATP5G2Q06055 141 aa13.83□□□□□ -0.2
PDLIM2-206ENST00000409141 AKIP1Q9NQ31 210 aa13.83□□□□□ -0.2
PDLIM2-206ENST00000409141 TRBV9A0A0B4J1U6 114 aa13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 FAM223BA6NKX1 122 aa13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 FGF2P09038 288 aa13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 PSMB6P28072 239 aa13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 PIGPP57054 158 aa13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 ZNF45Q02386 682 aa13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 ZNF343Q6P1L6 599 aa13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 FAM223AQ8IWN6 122 aa13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 NECAP1Q8NC96 275 aa13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 MARCH1Q8TCQ1 289 aa13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 MRAPQ8TCY5 172 aa13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 ZMAT5Q9UDW3 170 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-206ENST00000409141 ANKRD20A5PA0PJZ0 165 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 CGB1A6NKQ9 187 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 SNAPC5O75971 98 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 OR2J3O76001 311 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 DHFRP00374 187 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 SERPINE2P07093 398 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 C19orf35Q6ZS72 473 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 CADM3Q8N126 398 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 OR4C16Q8NGL9 310 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 OR13C8Q8NGS7 320 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 COPZ2Q9P299 210 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 PEF1Q9UBV8 284 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 NSG2Q9Y328 171 aa13.81□□□□□ -0.2
PDLIM2-206ENST00000409141 TEX50A0A1B0GTY4 177 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 REG1AP05451 166 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 CRYGCP07315 174 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 ZP3P21754 424 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 PTBP1P26599 531 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 PYDC2Q56P42 97 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 CCDC71LQ8N9Z2 235 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 THAP7Q9BT49 309 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 QTRT1Q9BXR0 403 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 FBXL7Q9UJT9 491 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 IGKV1-39P01597 117 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 IGKV1D-39P04432 117 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 CTSDP07339 412 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 TRAPPC2P0DI81 140 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 TRAPPC2BP0DI82 140 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 DEFA4P12838 97 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 CTRB1P17538 263 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 ECI1P42126 302 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 INSL3P51460 131 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 EXOSC2Q13868 293 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 CTRB2Q6GPI1 263 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 OR1L8Q8NGR8 309 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 MRGPRFQ96AM1 343 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 SEC22AQ96IW7 307 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 TSC22D3Q99576 134 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 SRSF8Q9BRL6 282 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 HINT2Q9BX68 163 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 PRNDQ9UKY0 176 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 C14orf166Q9Y224 244 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 OR51B2Q9Y5P1 312 aa13.8□□□□□ -0.2
PDLIM2-206ENST00000409141 TGP01266 2768 aa13.79□□□□□ -0.2
PDLIM2-206ENST00000409141 C3orf85A0A1B0GTC6 90 aa13.79□□□□□ -0.2
PDLIM2-206ENST00000409141 H0Y980 276 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms