RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 SOX15O60248 233 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 VENTXO95231 258 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 GLRXP35754 106 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 TIMM23BQ5SRD1 257 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 SPATA31B1PQ5VZV4 182 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 ANAPC16Q96DE5 110 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 SNRNP40Q96DI7 357 aaKnown RBP13.61□□□□□ -0.23
COL23A1-202ENST00000407622 RHOVQ96L33 236 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 DCAF16Q9NXF7 216 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 ZNRD1Q9P1U0 126 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 ZNF729A6NN14 1252 aaPredicted RBP13.61□□□□□ -0.23
COL23A1-202ENST00000407622 C15orf61A6NNL5 157 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 GGCTO75223 188 aaKnown RBP13.61□□□□□ -0.23
COL23A1-202ENST00000407622 MMP23AO75900 390 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 TMPRSS3P57727 454 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 RPP30P78346 268 aaKnown RBP13.61□□□□□ -0.23
COL23A1-202ENST00000407622 OR4A47Q6IF82 309 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 ZADH2Q8N4Q0 377 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 OR2T10Q8NGZ9 312 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 PFDN5Q99471 154 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 FUT9Q9Y231 359 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 SPTBN2O15020 2390 aa13.6□□□□□ -0.23
COL23A1-202ENST00000407622 IGLV3-9A0A075B6K5 115 aa13.6□□□□□ -0.23
COL23A1-202ENST00000407622 MPDU1O75352 247 aa13.6□□□□□ -0.23
COL23A1-202ENST00000407622 AMBPP02760 352 aa13.6□□□□□ -0.23
COL23A1-202ENST00000407622 GNG10P50151 68 aa13.6□□□□□ -0.23
COL23A1-202ENST00000407622 FAM78BQ5VT40 261 aa13.6□□□□□ -0.23
COL23A1-202ENST00000407622 OR1P1Q8NH06 330 aa13.6□□□□□ -0.23
COL23A1-202ENST00000407622 OR4S2Q8NH73 311 aa13.6□□□□□ -0.23
COL23A1-202ENST00000407622 TMEM37Q8WXS4 190 aa13.6□□□□□ -0.23
COL23A1-202ENST00000407622 GCM1Q9NP62 436 aa13.6□□□□□ -0.23
COL23A1-202ENST00000407622 LSM4Q9Y4Z0 139 aaKnown RBP13.6□□□□□ -0.23
COL23A1-202ENST00000407622 KBTBD11-OT1A0A1B0GTJ5 212 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 XKRY2A2RUG3 117 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 K7EM74 188 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 PDE6DO43924 150 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 NDUFS6O75380 124 aaKnown RBP13.59□□□□□ -0.23
COL23A1-202ENST00000407622 STAG3L2P0CL84 134 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 STAG3L3P0CL85 134 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 TMEM249Q2WGJ8 235 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 LYG1Q8N1E2 194 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 KCNIP2Q9NS61 270 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 SCO2A0A1W2PP80 73 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 IL6RP08887 468 aaPredicted RBP13.59□□□□□ -0.23
COL23A1-202ENST00000407622 ACTL10Q5JWF8 245 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 FAM216BQ8N7L0 139 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 FAM122AQ96E09 287 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 SEPSECSQ9HD40 501 aaKnown RBP13.59□□□□□ -0.23
COL23A1-202ENST00000407622 IDI2-AS1Q9NZ38 188 aa13.59□□□□□ -0.23
COL23A1-202ENST00000407622 YTHDF2Q9Y5A9 579 aaKnown RBP13.59□□□□□ -0.23
COL23A1-202ENST00000407622 TRGV8A0A0C4DH27 118 aa13.58□□□□□ -0.23
COL23A1-202ENST00000407622 LY86O95711 162 aa13.58□□□□□ -0.23
COL23A1-202ENST00000407622 HNF1AP20823 631 aa13.58□□□□□ -0.23
COL23A1-202ENST00000407622 FAM222BQ8WU58 562 aa13.58□□□□□ -0.23
COL23A1-202ENST00000407622 GAFA1Q96PS6 74 aa13.58□□□□□ -0.23
COL23A1-202ENST00000407622 CCL13Q99616 98 aa13.58□□□□□ -0.23
COL23A1-202ENST00000407622 HINT2Q9BX68 163 aa13.58□□□□□ -0.23
COL23A1-202ENST00000407622 TMEM14BQ9NUH8 114 aa13.58□□□□□ -0.23
COL23A1-202ENST00000407622 DYSFO75923 2080 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 TMPRSS2O15393 492 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 FOXH1O75593 365 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 CA2P00918 260 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 IGHV1-46P01743 117 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 IL3RAP26951 378 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 SRP14P37108 136 aaKnown RBP13.58□□□□□ -0.24
COL23A1-202ENST00000407622 KIR2DS2P43631 304 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 RAB7AP51149 207 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 MRPS11P82912 194 aaKnown RBP13.58□□□□□ -0.24
COL23A1-202ENST00000407622 FAM27E3Q08E93 113 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 STUMQ69YW2 141 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 ZNF439Q8NDP4 499 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 SLC24A4Q8NFF2 622 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 ZCCHC14Q8WYQ9 949 aaKnown RBP13.58□□□□□ -0.24
COL23A1-202ENST00000407622 SSUH2Q9Y2M2 353 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 ADGRG4Q8IZF6 3080 aa13.58□□□□□ -0.24
COL23A1-202ENST00000407622 GATCO43716 136 aaKnown RBP13.57□□□□□ -0.24
COL23A1-202ENST00000407622 NPY1RP25929 384 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 UNQ6494/PRO21346Q6UXR6 183 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 STPG3Q8N7X2 389 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 FAM216AQ8WUB2 273 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 PRO1933Q9H354 126 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 RNF7Q9UBF6 113 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 ARFGEF3Q5TH69 2177 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 DMXL2Q8TDJ6 3036 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 GATA4P43694 442 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 TNFAIP6P98066 277 aaPredicted RBP13.57□□□□□ -0.24
COL23A1-202ENST00000407622 EFNB3Q15768 340 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 MOB3BQ86TA1 216 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 NPVFQ9HCQ7 196 aa13.57□□□□□ -0.24
COL23A1-202ENST00000407622 FOXA2Q9Y261 457 aaPredicted RBP13.57□□□□□ -0.24
COL23A1-202ENST00000407622 TRGV10A0A0A0MS01 117 aa13.56□□□□□ -0.24
COL23A1-202ENST00000407622 CXorf1O96002 111 aa13.56□□□□□ -0.24
COL23A1-202ENST00000407622 IGKV1-16P04430 117 aa13.56□□□□□ -0.24
COL23A1-202ENST00000407622 TYMSP04818 313 aa13.56□□□□□ -0.24
COL23A1-202ENST00000407622 IGFBP2P18065 325 aa13.56□□□□□ -0.24
COL23A1-202ENST00000407622 HSPE1P61604 102 aaKnown RBP13.56□□□□□ -0.24
COL23A1-202ENST00000407622 COA6Q5JTJ3 125 aaKnown RBP13.56□□□□□ -0.24
COL23A1-202ENST00000407622 ANKRD11Q6UB99 2663 aaPredicted RBP13.56□□□□□ -0.24
COL23A1-202ENST00000407622 KALRNO60229 2985 aa13.56□□□□□ -0.24
COL23A1-202ENST00000407622 F6UZH7 168 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms