RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 MS4A10Q96PG2 267 aa16.5■□□□□ 0.23
TSPAN4-206ENST00000397408 FYTTD1Q96QD9 318 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-206ENST00000397408 ZNF355PQ9NSJ1 428 aa16.5■□□□□ 0.23
TSPAN4-206ENST00000397408 IGKV1-39P01597 117 aa16.49■□□□□ 0.23
TSPAN4-206ENST00000397408 IGKV1D-39P04432 117 aa16.49■□□□□ 0.23
TSPAN4-206ENST00000397408 TPPP2P59282 170 aa16.49■□□□□ 0.23
TSPAN4-206ENST00000397408 ETV3LQ6ZN32 361 aa16.49■□□□□ 0.23
TSPAN4-206ENST00000397408 C4orf3Q8WVX3 66 aa16.49■□□□□ 0.23
TSPAN4-206ENST00000397408 UBE2E2Q96LR5 201 aa16.49■□□□□ 0.23
TSPAN4-206ENST00000397408 GNB4Q9HAV0 340 aa16.49■□□□□ 0.23
TSPAN4-206ENST00000397408 COA4Q9NYJ1 87 aa16.49■□□□□ 0.23
TSPAN4-206ENST00000397408 VSIG4Q9Y279 399 aa16.49■□□□□ 0.23
TSPAN4-206ENST00000397408 TEX13DA0A0J9YY54 714 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 A0A1B0GW64 132 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 HMX3A6NHT5 357 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 TEX22C9J3V5 150 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 E7EUB6 86 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 H3BUA1 57 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 DEFB136Q30KP8 78 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 SP6Q3SY56 376 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 SEC22AQ96IW7 307 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 SCGB3A2Q96PL1 93 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 DUX3Q96PT4 197 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 SLA2Q9H6Q3 261 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 NAA60Q9H7X0 242 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 AKIP1Q9NQ31 210 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 PTTG2Q9NZH5 202 aa16.48■□□□□ 0.23
TSPAN4-206ENST00000397408 TRGV3P03979 118 aa16.47■□□□□ 0.23
TSPAN4-206ENST00000397408 OR9G9P0C7N8 305 aa16.47■□□□□ 0.23
TSPAN4-206ENST00000397408 TRIM16LQ309B1 348 aa16.47■□□□□ 0.23
TSPAN4-206ENST00000397408 ADAD2Q8NCV1 583 aaKnown RBP16.47■□□□□ 0.23
TSPAN4-206ENST00000397408 OR5B12Q96R08 314 aa16.47■□□□□ 0.23
TSPAN4-206ENST00000397408 COMMD5Q9GZQ3 224 aa16.47■□□□□ 0.23
TSPAN4-206ENST00000397408 NSG2Q9Y328 171 aa16.47■□□□□ 0.23
TSPAN4-206ENST00000397408 NOTCH3Q9UM47 2321 aa16.47■□□□□ 0.23
TSPAN4-206ENST00000397408 SNAPC5O75971 98 aa16.46■□□□□ 0.23
TSPAN4-206ENST00000397408 FGF2P09038 288 aa16.46■□□□□ 0.23
TSPAN4-206ENST00000397408 OR5AC1P0C628 307 aa16.46■□□□□ 0.23
TSPAN4-206ENST00000397408 IL7P13232 177 aa16.46■□□□□ 0.23
TSPAN4-206ENST00000397408 OR2B8PP59922 312 aa16.46■□□□□ 0.23
TSPAN4-206ENST00000397408 LINC00299Q6ZSB3 139 aa16.46■□□□□ 0.23
TSPAN4-206ENST00000397408 CADM3Q8N126 398 aa16.46■□□□□ 0.23
TSPAN4-206ENST00000397408 RAX2Q96IS3 184 aa16.46■□□□□ 0.23
TSPAN4-206ENST00000397408 LINC00854A0A1B0GVQ3 168 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 CRYM-AS1A6NIL9 109 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 CGB1A6NKQ9 187 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 B3GALNT1O75752 331 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 UCP1P25874 307 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 MYCNOSP40205 109 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 DEFA5Q01523 94 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 H2BFWTQ7Z2G1 175 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 TMEM230Q96A57 120 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 TSC22D3Q99576 134 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 CCL24O00175 119 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 IGHV3-11P01762 117 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 AREGP15514 252 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 AKR1C2P52895 323 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 SLC25A42Q86VD7 318 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 TTC9CQ8N5M4 171 aa16.45■□□□□ 0.22
TSPAN4-206ENST00000397408 I3L521 148 aa16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 BRI3O95415 125 aa16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 IGKV1-5P01602 117 aa16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 PRH1P02810 166 aa16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 CD33P20138 364 aa16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 SGPP2Q8IWX5 399 aa16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 MRPL41Q8IXM3 137 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 LINC00482Q8N8I6 264 aa16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 P2RX4Q99571 388 aa16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 QTRT1Q9BXR0 403 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 TMEM222Q9H0R3 208 aa16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 ALX4Q9H161 411 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 PRNDQ9UKY0 176 aa16.44■□□□□ 0.22
TSPAN4-206ENST00000397408 NAP1L6A6NFF2 107 aa16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 C15orf61A6NNL5 157 aa16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 NPIPB5A8MRT5 1133 aa16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 ATG12O94817 140 aa16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 LGALS1P09382 135 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 AKR1C4P17516 323 aa16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 RUNX1Q01196 453 aa16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 C19orf35Q6ZS72 473 aa16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 TMED4Q7Z7H5 227 aa16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 OR1L8Q8NGR8 309 aa16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 SLC25A21Q9BQT8 299 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 ZNF257Q9Y2Q1 563 aa16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 OR51B2Q9Y5P1 312 aa16.43■□□□□ 0.22
TSPAN4-206ENST00000397408 NOTCH1P46531 2555 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 TEX50A0A1B0GTY4 177 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 REG1AP05451 166 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 CCR6P51684 374 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 RAB25P57735 213 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 DHODHQ02127 395 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 IZUMO4Q1ZYL8 232 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 OR11H1Q8NG94 326 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 OR4A16Q8NH70 328 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 RNASE11Q8TAA1 199 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 LHFPL5Q8TAF8 219 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 GLYATL2Q8WU03 294 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 S100ZQ8WXG8 99 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 HINT2Q9BX68 163 aa16.42■□□□□ 0.22
TSPAN4-206ENST00000397408 TMEM14BQ9NUH8 114 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms