RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KITLGP21583 273 aa11.46□□□□□ -0.57
NUP98-204ENST00000397004 GCHFRP30047 84 aa11.46□□□□□ -0.57
NUP98-204ENST00000397004 FABP6P51161 128 aa11.46□□□□□ -0.57
NUP98-204ENST00000397004 UBE2NP61088 152 aaKnown RBP11.46□□□□□ -0.57
NUP98-204ENST00000397004 TOMM20LQ6UXN7 152 aa11.46□□□□□ -0.57
NUP98-204ENST00000397004 TMEM208Q9BTX3 173 aa11.46□□□□□ -0.57
NUP98-204ENST00000397004 PPIAL4AQ9Y536 164 aa11.46□□□□□ -0.57
NUP98-204ENST00000397004 SPINK4O60575 86 aa11.46□□□□□ -0.57
NUP98-204ENST00000397004 ZNF25P17030 456 aaPredicted RBP11.46□□□□□ -0.57
NUP98-204ENST00000397004 PDLIM3Q53GG5 364 aaPredicted RBP11.46□□□□□ -0.57
NUP98-204ENST00000397004 DDB2Q92466 427 aa11.46□□□□□ -0.57
NUP98-204ENST00000397004 TMEM68Q96MH6 324 aa11.46□□□□□ -0.57
NUP98-204ENST00000397004 ZNF705FA8MVS1 300 aaPredicted RBP11.46□□□□□ -0.58
NUP98-204ENST00000397004 ZNF705DP0CH99 300 aaPredicted RBP11.46□□□□□ -0.58
NUP98-204ENST00000397004 ZNF705BP0CI00 300 aaPredicted RBP11.46□□□□□ -0.58
NUP98-204ENST00000397004 SLC35B1P78383 322 aa11.46□□□□□ -0.58
NUP98-204ENST00000397004 DUX4L9Q6RFH8 374 aaPredicted RBP11.46□□□□□ -0.58
NUP98-204ENST00000397004 IL36BQ9NZH7 164 aa11.46□□□□□ -0.58
NUP98-204ENST00000397004 PAM16Q9Y3D7 125 aa11.46□□□□□ -0.58
NUP98-204ENST00000397004 PCNX2A6NKB5 2137 aa11.46□□□□□ -0.58
NUP98-204ENST00000397004 ZZEF1O43149 2961 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 ATMQ13315 3056 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 LINC00869P0C866 280 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 PRAMEF5Q5TYX0 476 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 MIR17HGQ75NE6 70 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 STPG3Q8N7X2 389 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 ZNRF1Q8ND25 227 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 NANOS1Q8WY41 292 aaKnown RBP11.45□□□□□ -0.58
NUP98-204ENST00000397004 ICE1Q9Y2F5 2266 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 IGHV3OR15-7A0A075B7D8 119 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 MDFIC2A0A1B0GVS7 189 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 M0R1X1 148 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 IGKV3-15P01624 115 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 IER3P46695 156 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 VWA1Q6PCB0 445 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 EAF1Q96JC9 268 aaPredicted RBP11.45□□□□□ -0.58
NUP98-204ENST00000397004 HEYLQ9NQ87 328 aaPredicted RBP11.45□□□□□ -0.58
NUP98-204ENST00000397004 TMEM140Q9NV12 185 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 HEATR1Q9H583 2144 aaKnown RBP11.45□□□□□ -0.58
NUP98-204ENST00000397004 CXorf1O96002 111 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 ZNF883P0CG24 379 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 GATA2P23769 480 aaPredicted RBP11.45□□□□□ -0.58
NUP98-204ENST00000397004 ARG2P78540 354 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 MLANAQ16655 118 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 KIAA1644Q3SXP7 199 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 PLA2G2CQ5R387 149 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 ZNF705AQ6ZN79 300 aaPredicted RBP11.45□□□□□ -0.58
NUP98-204ENST00000397004 FAM214BQ7L5A3 538 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 VN1R17PQ8TDU5 208 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 TCF19Q9Y242 345 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 DSCAML1Q8TD84 2053 aa11.45□□□□□ -0.58
NUP98-204ENST00000397004 IGFBP2P18065 325 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 HTD2P86397 168 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 RNASE7Q9H1E1 156 aaKnown RBP11.44□□□□□ -0.58
NUP98-204ENST00000397004 GNB4Q9HAV0 340 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 TACC2O95359 2948 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 TRGV5A0A0B4J1U4 118 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 A0A1B0GWJ7 208 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 J3QW42 95 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 GPR12P47775 334 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 ZNF90Q03938 601 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 GUSBP1Q15486 140 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 ZNRD1Q9P1U0 126 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 TNFSF13O75888 250 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 PRDX2P32119 198 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 FAM201AQ5SY85 155 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 DOLPP1Q86YN1 238 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 OR1L6Q8NGR2 347 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 C11orf52Q96A22 123 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 DUSP13Q9UII6 198 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 INTS1Q8N201 2190 aaKnown RBP11.44□□□□□ -0.58
NUP98-204ENST00000397004 BDP1A6H8Y1 2624 aa11.44□□□□□ -0.58
NUP98-204ENST00000397004 CECR9P0C854 216 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 BRS3P32247 399 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 PRR20EP86478 221 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 PRR20CP86479 221 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 PRR20DP86480 221 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 PRR20BP86481 221 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 PRR20AP86496 221 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 OR8I2Q8N0Y5 310 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 TCTEX1D1Q8N7M0 179 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 C20orf144Q9BQM9 153 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 ACTL6BO94805 426 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 CRISP2P16562 243 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 OR4P4Q8NGL7 312 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 CXXC4Q9H2H0 198 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 RYDENQ9NUL5 291 aaKnown RBP11.43□□□□□ -0.58
NUP98-204ENST00000397004 TNFSF15O95150 251 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 IGLV2-8P01709 118 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 TFPI2P48307 235 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 FXYD3Q14802 87 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 MMD2Q8IY49 270 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 LRRC29Q8WV35 223 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 PARD6AQ9NPB6 346 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 CLCF1Q9UBD9 225 aa11.43□□□□□ -0.58
NUP98-204ENST00000397004 MORN5Q5VZ52 161 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 OR4A16Q8NH70 328 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 ZNF891A8MT65 544 aaPredicted RBP11.42□□□□□ -0.58
NUP98-204ENST00000397004 MPDU1O75352 247 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 CA2P00918 260 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms