RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 GHRHP01286 108 aa11.96□□□□□ -0.49
COL4A3-202ENST00000396578 WDR82Q6UXN9 313 aa11.96□□□□□ -0.49
COL4A3-202ENST00000396578 CNTFRP26992 372 aa11.96□□□□□ -0.49
COL4A3-202ENST00000396578 PEBP1P30086 187 aaKnown RBP11.96□□□□□ -0.49
COL4A3-202ENST00000396578 TMEM187Q14656 261 aa11.96□□□□□ -0.49
COL4A3-202ENST00000396578 C1orf100Q5SVJ3 147 aa11.96□□□□□ -0.49
COL4A3-202ENST00000396578 ZNF818PQ6ZRF7 136 aa11.96□□□□□ -0.49
COL4A3-202ENST00000396578 CENPVL1A0A0U1RR11 272 aa11.96□□□□□ -0.49
COL4A3-202ENST00000396578 ZFP36L2P47974 494 aaKnown RBP11.96□□□□□ -0.49
COL4A3-202ENST00000396578 FAM214BQ7L5A3 538 aa11.96□□□□□ -0.49
COL4A3-202ENST00000396578 PIMREGQ9BSJ6 248 aa11.96□□□□□ -0.49
COL4A3-202ENST00000396578 JPT1Q9UK76 154 aa11.96□□□□□ -0.49
COL4A3-202ENST00000396578 A0A1B0GUT8 65 aa11.96□□□□□ -0.5
COL4A3-202ENST00000396578 PEX7O00628 323 aa11.96□□□□□ -0.5
COL4A3-202ENST00000396578 NDUFA3O95167 84 aa11.96□□□□□ -0.5
COL4A3-202ENST00000396578 ST6GALNAC3Q8NDV1 305 aa11.96□□□□□ -0.5
COL4A3-202ENST00000396578 WDYHV1Q96HA8 205 aa11.96□□□□□ -0.5
COL4A3-202ENST00000396578 TCF19Q9Y242 345 aa11.96□□□□□ -0.5
COL4A3-202ENST00000396578 CD8AP01732 235 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 UCP3P55916 312 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 CYP2G1PQ6ZSU1 146 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 ABHD12Q8N2K0 398 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 POC1AQ8NBT0 407 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 A0A0J9YW62 118 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 SYNGR3O43761 229 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 SLC25A20O43772 301 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 ZNF826PQ6ZT77 177 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 OR11H4Q8NGC9 324 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 MARF1Q9Y4F3 1742 aaKnown RBP11.95□□□□□ -0.5
COL4A3-202ENST00000396578 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 TRBV5-7A0A0A0MS05 114 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 ZNF815PA8K554 130 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 PRR33A8MZF0 331 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 SLC25A47Q6Q0C1 308 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 FBLIM1Q8WUP2 373 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 Q96M66 194 aa11.95□□□□□ -0.5
COL4A3-202ENST00000396578 FOXA3P55318 350 aaPredicted RBP11.94□□□□□ -0.5
COL4A3-202ENST00000396578 EFNB1P98172 346 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 RALGAPA2Q2PPJ7 1873 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 A0A1B0GW15 77 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 AHRRA9YTQ3 701 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 NPIPB11E5RHQ5 1161 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 H3BTX0 84 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 SNAI2O43623 268 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 Q5PR19 223 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 OR2K2Q8NGT1 345 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 GATAD1Q8WUU5 269 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 NPCDR1Q9BY65 106 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 OPN3Q9H1Y3 402 aaPredicted RBP11.94□□□□□ -0.5
COL4A3-202ENST00000396578 M0R381 172 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 TMEM186Q96B77 213 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 SLC25A38Q96DW6 304 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 NPIPB4C9JG80 1138 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 NUTF2P61970 127 aaKnown RBP11.94□□□□□ -0.5
COL4A3-202ENST00000396578 TRAV9-1A0A075B6T8 112 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 C9JCJ5 164 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 ZIC3O60481 467 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 ANAPC13Q9BS18 74 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 ASIPP42127 132 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 ICAM4Q14773 271 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 LRTM2Q8N967 370 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 ST6GALNAC6Q969X2 333 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 PTPRDP23468 1912 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 IGHV1-45A0A0A0MS14 117 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 PPIAL4CA0A0B4J2A2 164 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 IGKV3-20P01619 116 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 FTH1P19P0C7X4 201 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 PPIAL4GP0DN37 164 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 FUT5Q11128 374 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 TGIF1Q15583 401 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 SSBP4Q9BWG4 385 aaPredicted RBP11.94□□□□□ -0.5
COL4A3-202ENST00000396578 CLEC7AQ9BXN2 247 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 LHFPL6Q9Y693 200 aa11.94□□□□□ -0.5
COL4A3-202ENST00000396578 A0A087WWC5 75 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 MYO7BQ6PIF6 2116 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 CASP8AP2Q9UKL3 1982 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 TGFAP01135 160 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 IFITM2Q01629 132 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 TMEM52Q8NDY8 209 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 LEAP2Q969E1 77 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 PEAR1Q5VY43 1037 aaPredicted RBP11.93□□□□□ -0.5
COL4A3-202ENST00000396578 CD200R1LQ6Q8B3 271 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 ZNF784Q8NCA9 323 aaPredicted RBP11.93□□□□□ -0.5
COL4A3-202ENST00000396578 NPIPB3Q92617 1050 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 PGPEP1LA6NFU8 196 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 ORMDL3Q8N138 153 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
COL4A3-202ENST00000396578 ACSF3Q4G176 576 aaPredicted RBP11.93□□□□□ -0.5
COL4A3-202ENST00000396578 Q6AWC8 147 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 FOXS1O43638 330 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 C5orf30Q96GV9 206 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 DCTN5Q9BTE1 182 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 THADAQ6YHU6 1953 aa11.93□□□□□ -0.5
COL4A3-202ENST00000396578 IGHV3-48P01763 117 aa11.92□□□□□ -0.5
COL4A3-202ENST00000396578 RCC1LQ96I51 464 aaKnown RBP11.92□□□□□ -0.5
COL4A3-202ENST00000396578 DUSP15Q9H1R2 295 aaPredicted RBP11.92□□□□□ -0.5
COL4A3-202ENST00000396578 MOSP00540 346 aa11.92□□□□□ -0.5
COL4A3-202ENST00000396578 NPFFR1Q9GZQ6 430 aa11.92□□□□□ -0.5
COL4A3-202ENST00000396578 CARHSP1Q9Y2V2 147 aaKnown RBP11.92□□□□□ -0.5
COL4A3-202ENST00000396578 CADP27708 2225 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms