RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 MAS1LP35410 378 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 TAF15Q92804 592 aaKnown RBP eCLIP4.81□□□□□ -1.642e-6■■□□□ 11.9
RFFL-202ENST00000394597 NABP1Q96AH0 204 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 GPHA2Q96T91 129 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 QTRT1Q9BXR0 403 aaKnown RBP4.81□□□□□ -1.64
RFFL-202ENST00000394597 CCL28Q9NRJ3 127 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 RAXQ9Y2V3 346 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 CEP192Q8TEP8 1941 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 HTTP42858 3142 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 RBFOX2O43251 390 aaKnown RBP eCLIP4.81□□□□□ -1.642e-6■■□□□ 13
RFFL-202ENST00000394597 HLA-DQA1P01909 254 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 CDKN1AP38936 164 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 RBM11P57052 281 aaKnown RBP4.81□□□□□ -1.64
RFFL-202ENST00000394597 TCTAP57738 103 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 RBX1P62877 108 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 MPV17L2Q567V2 206 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 TIMM23BQ5SRD1 257 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 FAM216AQ8WUB2 273 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 RNF138Q8WVD3 245 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 TMEM56Q96MV1 263 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 TPPP3Q9BW30 176 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 ELOVL5Q9NYP7 299 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 MSRB2Q9Y3D2 182 aa4.81□□□□□ -1.64
RFFL-202ENST00000394597 TRAV9-2A0A087WT02 112 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 IGHV2OR16-5A0A0B4J2B6 119 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 hCG_38984A0A1B0GV85 526 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 OR4C46A6NHA9 309 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 H3BUT2 72 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 DKK1O94907 266 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 IGHG3P01860 377 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 MFAP2P55001 183 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FGF12P61328 243 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 PAX2Q02962 417 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 TBR1Q16650 682 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A2PQ658T7 463 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 SPSB3Q6PJ21 355 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 MMD2Q8IY49 270 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 SAXO1Q8IYX7 474 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 OR1N2Q8NGR9 330 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 OR4A16Q8NH70 328 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 KLF14Q8TD94 323 aaPredicted RBP4.8□□□□□ -1.64
RFFL-202ENST00000394597 OR8B2Q96RD0 313 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 ZFHX2Q9C0A1 2572 aaPredicted RBP4.8□□□□□ -1.64
RFFL-202ENST00000394597 TRGV10A0A0A0MS01 117 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 SLC17A3O00476 420 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 SNAI2O43623 268 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 HYPMO75409 117 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 LEPROTL1O95214 131 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 PFN1P07737 140 aaKnown RBP4.8□□□□□ -1.64
RFFL-202ENST00000394597 CCL1P22362 96 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 GPR12P47775 334 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 ARF6P62330 175 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 ACSM6Q6P461 480 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 TRAT1Q6PIZ9 186 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 Q6ZS92 163 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 ABHD14BQ96IU4 210 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 POM121L2Q96KW2 1035 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 PKIBQ9C010 78 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 ZNF319Q9P2F9 582 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 SPCS1Q9Y6A9 102 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 C7orf71A4D174 169 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A10PA6NDY2 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A18PA6NE21 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A16PA6NEW6 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A20PA6NIJ5 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A8PA6NJQ4 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A7PA6NKC0 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A22PA8MWA6 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A12PA8MX19 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A5PA8MXJ8 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A23PA8MXZ1 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 IFNL4K9M1U5 179 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 CORTO00230 105 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 NDUFB3O43676 98 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A15PP0C7V4 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A13PP0C7W8 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A14PP0C7W9 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FAM90A24PP0C7X0 464 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 LINC00869P0C866 280 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 GTF3C1Q12789 2109 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 TMEM95Q3KNT9 176 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 ZNF324BQ6AW86 544 aaPredicted RBP4.8□□□□□ -1.64
RFFL-202ENST00000394597 MOGAT3Q86VF5 341 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 SCCPDHQ8NBX0 429 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 FGFBP3Q8TAT2 258 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 CCL17Q92583 94 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 MRGPRFQ96AM1 343 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 KCNS1Q96KK3 526 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 ZNF488Q96MN9 340 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 PSMG3Q9BT73 122 aaPredicted RBP4.8□□□□□ -1.64
RFFL-202ENST00000394597 MS4A5Q9H3V2 200 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 SAP30LQ9HAJ7 183 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 RNF7Q9UBF6 113 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 HELTA6NFD8 242 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 SRSF10O75494 262 aaKnown RBP4.8□□□□□ -1.64
RFFL-202ENST00000394597 IGLC2P0DOY2 106 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 IGLC3P0DOY3 106 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 ESDP10768 282 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 NPBWR2P48146 333 aa4.8□□□□□ -1.64
RFFL-202ENST00000394597 ZNF816Q0VGE8 651 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms