RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ALX4Q9H161 411 aaPredicted RBP9.79□□□□□ -0.84
GGPS1-203ENST00000391855 SLC2A9Q9NRM0 540 aa9.79□□□□□ -0.84
GGPS1-203ENST00000391855 TMEM140Q9NV12 185 aa9.79□□□□□ -0.84
GGPS1-203ENST00000391855 TEX22C9J3V5 150 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 M0QYG6 137 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 UPK2O00526 184 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 CD74P04233 296 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 CD3DP04234 171 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 IL6RP08887 468 aaPredicted RBP9.78□□□□□ -0.84
GGPS1-203ENST00000391855 HOXD3P31249 432 aaPredicted RBP9.78□□□□□ -0.84
GGPS1-203ENST00000391855 IL18Q14116 193 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 MEF2DQ14814 521 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 LHFPL1Q86WI0 220 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 DCUN1D4Q92564 292 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 FYTTD1Q96QD9 318 aaKnown RBP9.78□□□□□ -0.84
GGPS1-203ENST00000391855 COMMD5Q9GZQ3 224 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 C6orf62Q9GZU0 229 aaPredicted RBP9.78□□□□□ -0.84
GGPS1-203ENST00000391855 RSL24D1Q9UHA3 163 aaKnown RBP9.78□□□□□ -0.84
GGPS1-203ENST00000391855 CEPT1Q9Y6K0 416 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 TNCP24821 2201 aa9.78□□□□□ -0.84
GGPS1-203ENST00000391855 TRBV9A0A0B4J1U6 114 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 CCDC160A6NGH7 325 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 MARCH11A6NNE9 402 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 RAB3DO95716 219 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 PRB2P02812 416 aaPredicted RBP9.77□□□□□ -0.85
GGPS1-203ENST00000391855 CRYGCP07315 174 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 APELAP0DMC3 54 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 HIST1H1BP16401 226 aaKnown RBP9.77□□□□□ -0.85
GGPS1-203ENST00000391855 ECI1P42126 302 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 LPAR6P43657 344 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 KRTAP10-11P60412 298 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 RND3P61587 244 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 RHOGP84095 191 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 PHLDA2Q53GA4 152 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 ZNF343Q6P1L6 599 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 HSD17B13Q7Z5P4 300 aaPredicted RBP9.77□□□□□ -0.85
GGPS1-203ENST00000391855 ZNF429Q86V71 674 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 NECAP1Q8NC96 275 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 MCFD2Q8NI22 146 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 TSC22D3Q99576 134 aa9.77□□□□□ -0.85
GGPS1-203ENST00000391855 NXF2Q9GZY0 626 aaKnown RBP9.77□□□□□ -0.85
GGPS1-203ENST00000391855 ZNF701M0R085 212 aaPredicted RBP9.76□□□□□ -0.85
GGPS1-203ENST00000391855 PGAM2P15259 253 aa9.76□□□□□ -0.85
GGPS1-203ENST00000391855 RPA2P15927 270 aa9.76□□□□□ -0.85
GGPS1-203ENST00000391855 PTBP1P26599 531 aaKnown RBP eCLIP9.76□□□□□ -0.85
GGPS1-203ENST00000391855 PSMB6P28072 239 aa9.76□□□□□ -0.85
GGPS1-203ENST00000391855 SLURP1P55000 103 aa9.76□□□□□ -0.85
GGPS1-203ENST00000391855 ATP5G2Q06055 141 aa9.76□□□□□ -0.85
GGPS1-203ENST00000391855 STEAP1BQ6NZ63 245 aa9.76□□□□□ -0.85
GGPS1-203ENST00000391855 TBC1D26Q86UD7 250 aa9.76□□□□□ -0.85
GGPS1-203ENST00000391855 CCDC71LQ8N9Z2 235 aa9.76□□□□□ -0.85
GGPS1-203ENST00000391855 DLX4Q92988 240 aaPredicted RBP9.76□□□□□ -0.85
GGPS1-203ENST00000391855 PEF1Q9UBV8 284 aaKnown RBP9.76□□□□□ -0.85
GGPS1-203ENST00000391855 HMX3A6NHT5 357 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 CYB5BO43169 146 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 GSTZ1O43708 216 aaPredicted RBP9.75□□□□□ -0.85
GGPS1-203ENST00000391855 SNAPC5O75971 98 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 CTRB1P17538 263 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 SMCPP49901 116 aaPredicted RBP9.75□□□□□ -0.85
GGPS1-203ENST00000391855 OR2B8PP59922 312 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 ZNF45Q02386 682 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 EXOSC2Q13868 293 aaKnown RBP9.75□□□□□ -0.85
GGPS1-203ENST00000391855 TATDN3Q17R31 274 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 KLK9Q2XQG4 91 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 ZNF585BQ52M93 769 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 CTRB2Q6GPI1 263 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 ACSM6Q6P461 480 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 TERB2Q8NHR7 220 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 ZFAND1Q8TCF1 268 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 ELOVL1Q9BW60 279 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 QTRT1Q9BXR0 403 aaKnown RBP9.75□□□□□ -0.85
GGPS1-203ENST00000391855 AKIP1Q9NQ31 210 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 FKBP11Q9NYL4 201 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 KLK9Q9UKQ9 250 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 DNAH3Q8TD57 4116 aa9.75□□□□□ -0.85
GGPS1-203ENST00000391855 DISC1C4P0D8 188 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 H0Y980 276 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 K7EIL1 84 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 SAP30O75446 220 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 B3GALNT1O75752 331 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 ATG12O94817 140 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 KRASP01116 189 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 SERPINE2P07093 398 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 AKAIN1P0CW23 69 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 SURF2Q15527 256 aaPredicted RBP9.74□□□□□ -0.85
GGPS1-203ENST00000391855 OR6Q1Q8NGQ2 317 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 OR1L8Q8NGR8 309 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 OR5B3Q8NH48 314 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 OR4C12Q96R67 309 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 RBM38Q9H0Z9 239 aaKnown RBP9.74□□□□□ -0.85
GGPS1-203ENST00000391855 COPZ2Q9P299 210 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 PRNDQ9UKY0 176 aa9.74□□□□□ -0.85
GGPS1-203ENST00000391855 A0A1B0GW64 132 aa9.73□□□□□ -0.85
GGPS1-203ENST00000391855 WI2-2373I1.2A0A1W2PRP0 233 aa9.73□□□□□ -0.85
GGPS1-203ENST00000391855 ANKRD34BA5PLL1 514 aa9.73□□□□□ -0.85
GGPS1-203ENST00000391855 FABP12A6NFH5 140 aa9.73□□□□□ -0.85
GGPS1-203ENST00000391855 E7EUB6 86 aa9.73□□□□□ -0.85
GGPS1-203ENST00000391855 OR2J3O76001 311 aa9.73□□□□□ -0.85
GGPS1-203ENST00000391855 CTSDP07339 412 aaPredicted RBP9.73□□□□□ -0.85
GGPS1-203ENST00000391855 TRAPPC2P0DI81 140 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms