RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 POLR1DQ9Y2S0 133 aa0.56□□□□□ -2.32
RNU6-550P-201ENST00000391057 COQ4Q9Y3A0 265 aa0.56□□□□□ -2.32
RNU6-550P-201ENST00000391057 GMEB1Q9Y692 573 aa0.56□□□□□ -2.32
RNU6-550P-201ENST00000391057 TONSLQ96HA7 1378 aa0.56□□□□□ -2.32
RNU6-550P-201ENST00000391057 SETD5Q9C0A6 1442 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 IGHV1-69-2A0A0G2JMI3 117 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 FAM25EA8MYX2 175 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 ITGB1BP1O14713 200 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 GEMIN2O14893 280 aaKnown RBP0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 CALUO43852 315 aaPredicted RBP0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 KRT75O95678 551 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 HLA-DRAP01903 254 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 HLA-DMBP28068 263 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 PSMB6P28072 239 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 FXYD2P54710 66 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 PPP1R1AQ13522 171 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 CDK10Q15131 360 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 C10orf55Q5SWW7 151 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 FAM19A2Q8N3H0 131 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 Q8N402 240 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 C12orf29Q8N999 325 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 OR5B17Q8NGF7 314 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 ANKRD7Q92527 254 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 DKKL1Q9UK85 242 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 BAIAP2Q9UQB8 552 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 PXMP4Q9Y6I8 212 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 SMARCA4P51532 1647 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 RAD50Q92878 1312 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 SYNRGQ9UMZ2 1314 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 MICAL3Q7RTP6 2002 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 KIF15Q9NS87 1388 aa0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 INTS1Q8N201 2190 aaKnown RBP0.55□□□□□ -2.32
RNU6-550P-201ENST00000391057 TRAV14DV4A0A0A6YYC5 116 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 DISC1C4P0D8 188 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 F5H768 121 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 GOLGA8MH3BSY2 632 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 LST1O00453 97 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 SSNA1O43805 119 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 PMP2P02689 132 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 REG1AP05451 166 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 METTL15P1P0C7V9 234 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 NFYAP23511 347 aaPredicted RBP0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 OR4D2P58180 307 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 TNFAIP6P98066 277 aaPredicted RBP0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 FABP9Q0Z7S8 132 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 ZNF345Q14585 488 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 CST9Q5W186 159 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 PLEKHG7Q6ZR37 379 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 TMEM251Q8N6I4 163 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 ZNF565Q8N9K5 539 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 ATP6V1G3Q96LB4 118 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 MRPL57Q9BQC6 102 aaKnown RBP0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 YIPF3Q9GZM5 350 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 OR8D2Q9GZM6 311 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 TRABDQ9H4I3 376 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 KIF24Q5T7B8 1368 aa0.54□□□□□ -2.32
RNU6-550P-201ENST00000391057 DIDO1Q9BTC0 2240 aaKnown RBP0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 IRGMA1A4Y4 181 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 GGT3PA6NGU5 568 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 TMEM212A6NML5 194 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 OR4C45A6NMZ5 311 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 C21orf140B9A014 251 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 CCL1P22362 96 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 UBE2G2P60604 165 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 BATFQ16520 125 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 COMMD7Q86VX2 200 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 TMEM161BQ8NDZ6 487 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 ROPN1LQ96C74 230 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 CMTM5Q96DZ9 223 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 OR51I2Q9H344 312 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 PAQR5Q9NXK6 330 aaPredicted RBP0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 OR5AC2Q9NZP5 309 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 FUT9Q9Y231 359 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 C15orf41Q9Y2V0 281 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 GREB1Q4ZG55 1949 aa0.53□□□□□ -2.32
RNU6-550P-201ENST00000391057 HEATR5BQ9P2D3 2071 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 GOLGA8KD6RF30 607 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 PFDN6O15212 129 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 NOS1APO75052 506 aaPredicted RBP0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 YEATS4O95619 227 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 IGHV3-7P01780 117 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 TYMSP04818 313 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 SRP19P09132 144 aaKnown RBP0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 FGF6P10767 208 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 KCNE1P15382 129 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 EIF2B2P49770 351 aaKnown RBP0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 SKP1P63208 163 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 RUNX1Q01196 453 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 RPL18Q07020 188 aaKnown RBP0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 ZNF439Q8NDP4 499 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 MAP1LC3AQ9H492 121 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 PLEKHJ1Q9NW61 149 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 ARFGEF3Q5TH69 2177 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 CUL9Q8IWT3 2517 aa0.52□□□□□ -2.33
RNU6-550P-201ENST00000391057 C1orf232A0A0U1RR37 186 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 COCHO43405 550 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 C1QAP02745 245 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 SHBGP04278 402 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 GLI3P10071 1580 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms