RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 DUTP33316 252 aaKnown RBP13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 GPR12P47775 334 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 SSTP61278 116 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 C2orf88Q9BSF0 95 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 HEYLQ9NQ87 328 aaPredicted RBP13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 IGFL2Q6UWQ7 119 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 C1orf229Q6ZS94 237 aaPredicted RBP13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 DIRC2Q96SL1 478 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 YTHDF2Q9Y5A9 579 aaKnown RBP13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 CUL9Q8IWT3 2517 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 ATMQ13315 3056 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 M0R1X1 148 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 PDE6DO43924 150 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 PRDX2P32119 198 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 ADMP35318 185 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 ZNF134P52741 427 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 GUSBP1Q15486 140 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 HLA-DRB5Q30154 266 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 C22orf34Q6ZV56 151 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 C1orf159Q96HA4 380 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 NOL4LQ96MY1 436 aaPredicted RBP13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 OR2V2Q96R30 315 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 HSD17B10Q99714 261 aaKnown RBP13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 PXMP4Q9Y6I8 212 aa13.43□□□□□ -0.26
NKX3-1-201ENST00000380871 SLC17A3O00476 420 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 ZCCHC24Q8N2G6 241 aaKnown RBP13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 GGTLC1Q9BX51 225 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 ELOVL5Q9NYP7 299 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 TMPRSS2O15393 492 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 MYOD1P15172 320 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 CBLN1P23435 193 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 SMIM21Q3B7S5 101 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 OCC1Q8TAD7 63 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 SEPSECSQ9HD40 501 aaKnown RBP13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 KCNIP2Q9NS61 270 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 F6UZH7 168 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 FOXH1O75593 365 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 PRSS33Q8NF86 280 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 POLR3KQ9Y2Y1 108 aaPredicted RBP13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 FAM215AQ9Y5M1 114 aa13.42□□□□□ -0.26
NKX3-1-201ENST00000380871 LCN2P80188 198 aa13.41□□□□□ -0.26
NKX3-1-201ENST00000380871 PDLIM3Q53GG5 364 aaPredicted RBP13.41□□□□□ -0.26
NKX3-1-201ENST00000380871 OR4A16Q8NH70 328 aa13.41□□□□□ -0.26
NKX3-1-201ENST00000380871 ITLN1Q8WWA0 313 aa13.41□□□□□ -0.26
NKX3-1-201ENST00000380871 FKBP11Q9NYL4 201 aa13.41□□□□□ -0.26
NKX3-1-201ENST00000380871 J3QW42 95 aa13.41□□□□□ -0.26
NKX3-1-201ENST00000380871 SPINT2O43291 252 aa13.41□□□□□ -0.26
NKX3-1-201ENST00000380871 SNHG12Q9BXW3 62 aa13.41□□□□□ -0.26
NKX3-1-201ENST00000380871 SLC25A15Q9Y619 301 aa13.41□□□□□ -0.26
NKX3-1-201ENST00000380871 TNCP24821 2201 aa13.41□□□□□ -0.26
NKX3-1-201ENST00000380871 K7EN84 100 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 GFRA3O60609 400 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 FAM122AQ96E09 287 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 MDFIC2A0A1B0GVS7 189 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 PRSS46E5RG02 174 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 IQCJQ1A5X6 159 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 DUX4L9Q6RFH8 374 aaPredicted RBP13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 LURAP1Q96LR2 239 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 TP53TG3Q9ULZ0 132 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 TP53TG5Q9Y2B4 290 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 F2Z2F3 143 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 CGAP01215 116 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 VDAC2P45880 294 aaPredicted RBP13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 TDRG1Q3Y452 100 aa13.4□□□□□ -0.26
NKX3-1-201ENST00000380871 IGKV1D-17A0A075B6S4 117 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 STAG3L2P0CL84 134 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 STAG3L3P0CL85 134 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 WFDC8Q8IUA0 241 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 RBMXL3Q8N7X1 1067 aaKnown RBP13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 KITLGP21583 273 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 TIMP3P35625 211 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 LINC00310P59036 64 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 FOXC1Q12948 553 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 MORN2Q502X0 79 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 ARSJQ5FYB0 599 aaPredicted RBP13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 PRR7Q8TB68 274 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 RAB1CQ92928 201 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 TMEM140Q9NV12 185 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 DCAF16Q9NXF7 216 aa13.39□□□□□ -0.27
NKX3-1-201ENST00000380871 OPRK1P41145 380 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 SPCS3P61009 180 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 RPL31P62899 125 aaKnown RBP13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 RELBQ01201 579 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 MS4A10Q96PG2 267 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 CD99P14209 185 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 CCKARP32238 428 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 KLF3P57682 345 aaPredicted RBP13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 RAB4BP61018 213 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 FOXL1Q12952 345 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 ACTL6BO94805 426 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 HPRT1P00492 218 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 OR5I1Q13606 314 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 C1orf162Q8NEQ5 155 aaPredicted RBP13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 NAGKQ9UJ70 344 aa13.38□□□□□ -0.27
NKX3-1-201ENST00000380871 TCAPO15273 167 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 IL6RP08887 468 aaPredicted RBP13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 IFI27L2Q9H2X8 130 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 TCF19Q9Y242 345 aa13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 ZNF705FA8MVS1 300 aaPredicted RBP13.37□□□□□ -0.27
NKX3-1-201ENST00000380871 SPINK4O60575 86 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms