RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 GNG12Q9UBI6 72 aa11.8□□□□□ -0.52
CLCN4-201ENST00000380829 KIAA1324LA8MWY0 1029 aaPredicted RBP11.8□□□□□ -0.52
CLCN4-201ENST00000380829 SLC25A6P12236 298 aa11.8□□□□□ -0.52
CLCN4-201ENST00000380829 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
CLCN4-201ENST00000380829 ETFRF1Q6IPR1 90 aa11.8□□□□□ -0.52
CLCN4-201ENST00000380829 TRAT1Q6PIZ9 186 aa11.8□□□□□ -0.52
CLCN4-201ENST00000380829 TMEM256Q8N2U0 113 aa11.8□□□□□ -0.52
CLCN4-201ENST00000380829 FGFRL1Q8N441 504 aa11.8□□□□□ -0.52
CLCN4-201ENST00000380829 ZBTB34Q8NCN2 500 aa11.8□□□□□ -0.52
CLCN4-201ENST00000380829 OR10G4Q8NGN3 311 aa11.8□□□□□ -0.52
CLCN4-201ENST00000380829 FAM222BQ8WU58 562 aa11.8□□□□□ -0.52
CLCN4-201ENST00000380829 PPIAL4AQ9Y536 164 aa11.8□□□□□ -0.52
CLCN4-201ENST00000380829 PIGBOS1A0A0B4J2F0 54 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 CEBPZOSA8MTT3 80 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 C17orf98A8MV24 154 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 NUPR1O60356 82 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 KRASP01116 189 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 GYPAP02724 150 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 ADH4P08319 380 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 G6PCP35575 357 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 BRWD1-AS2P59051 145 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 RBX1P62877 108 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 HTD2P86397 168 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 ACTL10Q5JWF8 245 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 ZNF295-AS1Q8N0V1 137 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 OR51G1Q8NGK1 321 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 CCL13Q99616 98 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 AGMATQ9BSE5 352 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 CISD1Q9NZ45 108 aaKnown RBP11.79□□□□□ -0.52
CLCN4-201ENST00000380829 LINC00473A8K010 186 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 IAPPP10997 89 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 UTF1Q5T230 341 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 STUMQ69YW2 141 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 TOMM20LQ6UXN7 152 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 C11orf42Q8N5U0 333 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 FAM216BQ8N7L0 139 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 GNPNAT1Q96EK6 184 aaPredicted RBP11.79□□□□□ -0.52
CLCN4-201ENST00000380829 PYGO2Q9BRQ0 406 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 RSG1Q9BU20 258 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 CTDSP1Q9GZU7 261 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 NCOR1P1Q9H4R4 102 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 PAM16Q9Y3D7 125 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 DYSFO75923 2080 aa11.79□□□□□ -0.52
CLCN4-201ENST00000380829 RAI1Q7Z5J4 1906 aaPredicted RBP11.78□□□□□ -0.52
CLCN4-201ENST00000380829 C17orf100A8MU93 164 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 S1PR2O95136 353 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 CLDN1O95832 211 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 CATR1Q13166 79 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 ZNF726P1Q15940 193 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 CST9LP1Q5W188 147 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 NEUROG1Q92886 237 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 SMIM7Q9BQ49 75 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 PKDREJQ9NTG1 2253 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 OR10J1P30954 320 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 TMEM267Q0VDI3 215 aaPredicted RBP11.78□□□□□ -0.52
CLCN4-201ENST00000380829 MORN2Q502X0 79 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 Q8TCH9 128 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 LEAP2Q969E1 77 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 GAFA1Q96PS6 74 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 RBKSQ9H477 322 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 RPRMQ9NS64 109 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 CALYQ9NYX4 217 aa11.78□□□□□ -0.52
CLCN4-201ENST00000380829 POLEQ07864 2286 aa11.77□□□□□ -0.52
CLCN4-201ENST00000380829 H7BYZ3 331 aa11.77□□□□□ -0.52
CLCN4-201ENST00000380829 SYNGR2O43760 224 aa11.77□□□□□ -0.52
CLCN4-201ENST00000380829 LOXL3P58215 753 aa11.77□□□□□ -0.52
CLCN4-201ENST00000380829 SAPCD1Q5SSQ6 148 aa11.77□□□□□ -0.52
CLCN4-201ENST00000380829 RPUSD4Q96CM3 377 aaKnown RBP11.77□□□□□ -0.52
CLCN4-201ENST00000380829 MS4A10Q96PG2 267 aa11.77□□□□□ -0.52
CLCN4-201ENST00000380829 JPT1Q9UK76 154 aa11.77□□□□□ -0.52
CLCN4-201ENST00000380829 FAM90A27PA6NNH2 459 aa11.77□□□□□ -0.53
CLCN4-201ENST00000380829 GPR12P47775 334 aa11.77□□□□□ -0.53
CLCN4-201ENST00000380829 CNN1P51911 297 aaKnown RBP11.77□□□□□ -0.53
CLCN4-201ENST00000380829 ZNF134P52741 427 aa11.77□□□□□ -0.53
CLCN4-201ENST00000380829 FAM3BP58499 235 aaPredicted RBP11.77□□□□□ -0.53
CLCN4-201ENST00000380829 CR1LQ2VPA4 569 aa11.77□□□□□ -0.53
CLCN4-201ENST00000380829 SLC25A24Q6NUK1 477 aa11.77□□□□□ -0.53
CLCN4-201ENST00000380829 OR5B12Q96R08 314 aa11.77□□□□□ -0.53
CLCN4-201ENST00000380829 OR6C3Q9NZP0 311 aa11.77□□□□□ -0.53
CLCN4-201ENST00000380829 SHISA9B4DS77 424 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 PROP1O75360 226 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 TNFRSF1AP19438 455 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 TAS2R30P59541 319 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 KLRB1Q12918 225 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 C17orf58Q2M2W7 97 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 RAB40CQ96S21 281 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 FAM234AQ9H0X4 552 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 CLDN14O95500 239 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 GRNP28799 593 aaKnown RBP11.76□□□□□ -0.53
CLCN4-201ENST00000380829 CA7P43166 264 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 RAB7AP51149 207 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 BAXQ07812 192 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 BSXQ3C1V8 233 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 RPL39P5Q59GN2 51 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 LINC01560Q8TB33 94 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 C22orf15Q8WYQ4 148 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 ZCCHC14Q8WYQ9 949 aaKnown RBP11.76□□□□□ -0.53
CLCN4-201ENST00000380829 ATP5SQ99766 215 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 MIEN1Q9BRT3 115 aa11.76□□□□□ -0.53
CLCN4-201ENST00000380829 SAP30LQ9HAJ7 183 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms