RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 NKX2-1P43699 371 aaPredicted RBP10.3□□□□□ -0.76
CBWD3-203ENST00000377344 SPINK9Q5DT21 86 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 CXorf66Q5JRM2 361 aaPredicted RBP10.3□□□□□ -0.76
CBWD3-203ENST00000377344 C5orf56Q8N8D9 126 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 OR4D5Q8NGN0 318 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 ZNF418Q8TF45 676 aaPredicted RBP10.3□□□□□ -0.76
CBWD3-203ENST00000377344 FYTTD1Q96QD9 318 aaKnown RBP10.3□□□□□ -0.76
CBWD3-203ENST00000377344 HINT2Q9BX68 163 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 MAGT1Q9H0U3 335 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 FKBP11Q9NYL4 201 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 POMT1Q9Y6A1 747 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 F8P00451 2351 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 WRBO00258 174 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 FGF16O43320 207 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 CHST1O43916 411 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 PITX3O75364 302 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 C9orf152Q5JTZ5 239 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 C16orf82Q7Z2V1 217 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 OR2T35Q8NGX2 323 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 PPP1R1CQ8WVI7 109 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 TMEM14BQ9NUH8 114 aa10.3□□□□□ -0.76
CBWD3-203ENST00000377344 FOXA2Q9Y261 457 aaPredicted RBP10.3□□□□□ -0.76
CBWD3-203ENST00000377344 LSM5Q9Y4Y9 91 aaKnown RBP10.3□□□□□ -0.76
CBWD3-203ENST00000377344 DNAJC9-AS1A6NH13 148 aa10.29□□□□□ -0.76
CBWD3-203ENST00000377344 CRLF1O75462 422 aa10.29□□□□□ -0.76
CBWD3-203ENST00000377344 MBPP02686 304 aaPredicted RBP10.29□□□□□ -0.76
CBWD3-203ENST00000377344 RAP2BP61225 183 aa10.29□□□□□ -0.76
CBWD3-203ENST00000377344 RAB32Q13637 225 aa10.29□□□□□ -0.76
CBWD3-203ENST00000377344 MRGPRG-AS1Q2M3A8 158 aa10.29□□□□□ -0.76
CBWD3-203ENST00000377344 C10orf55Q5SWW7 151 aa10.29□□□□□ -0.76
CBWD3-203ENST00000377344 ZNF429Q86V71 674 aa10.29□□□□□ -0.76
CBWD3-203ENST00000377344 ABHD5Q8WTS1 349 aa10.29□□□□□ -0.76
CBWD3-203ENST00000377344 TEX50A0A1B0GTY4 177 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 CEBPZOSA8MTT3 80 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 M0QZK8 103 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 FAM157CP0CG43 387 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 HSPE1P61604 102 aaKnown RBP10.28□□□□□ -0.76
CBWD3-203ENST00000377344 POLR2GP62487 172 aaKnown RBP eCLIP10.28□□□□□ -0.76
CBWD3-203ENST00000377344 TNFRSF9Q07011 255 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 SRSF4Q08170 494 aaKnown RBP10.28□□□□□ -0.76
CBWD3-203ENST00000377344 CD300CQ08708 224 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 TUSC1Q2TAM9 212 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 TMEM86BQ8N661 226 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 ASB13Q8WXK3 278 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 ST6GAL2Q96JF0 529 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 HSPB7Q9UBY9 170 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 SMLR1H3BR10 107 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 SSSCA1O60232 199 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 HLA-DRB1P01911 266 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 FGF2P09038 288 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 PSMB6P28072 239 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 MAS1LP35410 378 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 RPL27AP46776 148 aaKnown RBP10.28□□□□□ -0.76
CBWD3-203ENST00000377344 HOXA1P49639 335 aaPredicted RBP10.28□□□□□ -0.76
CBWD3-203ENST00000377344 COMPP49747 757 aaPredicted RBP10.28□□□□□ -0.76
CBWD3-203ENST00000377344 SPCS3P61009 180 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 CX3CL1P78423 397 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 ID3Q02535 119 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 FXYD3Q14802 87 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 OR1L8Q8NGR8 309 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 OR5B3Q8NH48 314 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 GRPEL2Q8TAA5 225 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 NEURL2Q9BR09 285 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 RBKSQ9H477 322 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 ENY2Q9NPA8 101 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 ESM1Q9NQ30 184 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 CACFD1Q9UGQ2 172 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 ZNF257Q9Y2Q1 563 aa10.28□□□□□ -0.76
CBWD3-203ENST00000377344 FAM90A26D6RGX4 464 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 K7EPK0 472 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 SYNGR2O43760 224 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 RLN2P04090 185 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 AMY1AP04745 511 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 APELAP0DMC3 54 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 IAPPP10997 89 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 BLCAPP62952 87 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 IL15RAQ13261 267 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 Q5BKY6 102 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 ZNF562Q6V9R5 426 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 OR52E5Q8NH55 327 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 SRSF12Q8WXF0 261 aaKnown RBP10.27□□□□□ -0.77
CBWD3-203ENST00000377344 HSPB9Q9BQS6 159 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 FAM103A1Q9BTL3 118 aaKnown RBP10.27□□□□□ -0.77
CBWD3-203ENST00000377344 RCL1Q9Y2P8 373 aaKnown RBP10.27□□□□□ -0.77
CBWD3-203ENST00000377344 MTORP42345 2549 aa10.27□□□□□ -0.77
CBWD3-203ENST00000377344 IGHV7-81A0A0B4J1V7 117 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 E7EUB6 86 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 GPR137BO60478 399 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 MED6O75586 246 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 MPC2O95563 127 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 PET100P0DJ07 73 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 FGL1Q08830 312 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 AARDQ4LEZ3 155 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 THAP6Q8TBB0 222 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 DTD1Q8TEA8 209 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 ARPC1AQ92747 370 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 PLEKHA3Q9HB20 300 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 PARP11Q9NR21 331 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 NDUFA4L2Q9NRX3 87 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 ZFP57Q9NU63 452 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms