RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 KCNAB3O43448 404 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 SYNGR2O43760 224 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 TMEM50AO95807 157 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 CRYGBP07316 175 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 MYOD1P15172 320 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 CXCL2P19875 107 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 BRS3P32247 399 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 DYNLT3P51808 116 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 HES1Q14469 280 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 HNF4GQ14541 408 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 MMDQ15546 238 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 MRGPRG-AS1Q2M3A8 158 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 ZNF546Q86UE3 836 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 ZNF429Q86V71 674 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 TEX45Q8NA69 505 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 MEGF9Q9H1U4 602 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 RBKSQ9H477 322 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 ZNF430Q9H8G1 570 aaPredicted RBP8.36□□□□□ -1.07
PDPN-203ENST00000376061 METTL1Q9UBP6 276 aaKnown RBP8.36□□□□□ -1.07
PDPN-203ENST00000376061 NUP50Q9UKX7 468 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 MSGN1A6NI15 193 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 RRHO14718 337 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 NBR2O15453 112 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 CD5LO43866 347 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 CHST1O43916 411 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 NDUFA3O95167 84 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 RLN2P04090 185 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 FGF2P09038 288 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 FBP1P09467 338 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 IAPPP10997 89 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 TMEM11P17152 192 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 F2RL1P55085 397 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 PAX9P55771 341 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 BPIFB3P59826 476 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 SPCS3P61009 180 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 RPL8P62917 257 aaKnown RBP8.35□□□□□ -1.07
PDPN-203ENST00000376061 PRSS8Q16651 343 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 PDLIM3Q53GG5 364 aaPredicted RBP8.35□□□□□ -1.07
PDPN-203ENST00000376061 SPINK9Q5DT21 86 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 OR52E5Q8NH55 327 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 NANPQ8TBE9 248 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 RAB40CQ96S21 281 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 FBXL15Q9H469 300 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 PLSCR3Q9NRY6 295 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 TCF19Q9Y242 345 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 SIGLEC9Q9Y336 463 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 FAM96BQ9Y3D0 163 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 HSPB11Q9Y547 144 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 OR51B2Q9Y5P1 312 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 PLXNB1O43157 2135 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 NAV3Q8IVL0 2385 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 MDFIC2A0A1B0GVS7 189 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 L7N2F9 121 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 MED6O75586 246 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 IFNA17P01571 189 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 FAM106CPP0CH98 169 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 PVALBP20472 110 aaPredicted RBP8.35□□□□□ -1.07
PDPN-203ENST00000376061 P2RY1P47900 373 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 VAMP2P63027 116 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 PJVKQ0ZLH3 352 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 ZNF345Q14585 488 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 LRRC75BQ2VPJ9 315 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 LGALSLQ3ZCW2 172 aaPredicted RBP8.35□□□□□ -1.07
PDPN-203ENST00000376061 C10orf55Q5SWW7 151 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 C9orf139Q6ZV77 190 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 BCL6BQ8N143 479 aaPredicted RBP8.35□□□□□ -1.07
PDPN-203ENST00000376061 NPBQ8NG41 125 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 PIFOQ8TCI5 191 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 DTD1Q8TEA8 209 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 AQP10Q96PS8 301 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 MFFQ9GZY8 342 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 CACFD1Q9UGQ2 172 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 ZNF257Q9Y2Q1 563 aa8.35□□□□□ -1.07
PDPN-203ENST00000376061 IGSF23A1L1A6 192 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 CEBPZOSA8MTT3 80 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 H3BP45 60 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 OR2F2O95006 317 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 HKR1P10072 659 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 TAS2R30P59541 319 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 HSPE1P61604 102 aaKnown RBP8.34□□□□□ -1.07
PDPN-203ENST00000376061 SSBP2P81877 361 aaPredicted RBP8.34□□□□□ -1.07
PDPN-203ENST00000376061 PRCDQ00LT1 54 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 C5orf64Q2M2E5 130 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 DEFB112Q30KQ8 113 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 ACOT7LQ6ZUV0 252 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 PPP1R27Q86WC6 154 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 MMD2Q8IY49 270 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 KCNRGQ8N5I3 272 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 OR2C3Q8N628 320 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 INO80EQ8NBZ0 244 aaPredicted RBP8.34□□□□□ -1.07
PDPN-203ENST00000376061 OR5B3Q8NH48 314 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 C22orf15Q8WYQ4 148 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 SMIM8Q96KF7 97 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 SSX3Q99909 188 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 COMMD5Q9GZQ3 224 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 LYRM2Q9NU23 88 aaPredicted RBP8.34□□□□□ -1.07
PDPN-203ENST00000376061 FKBP11Q9NYL4 201 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 KIAA1456Q9P272 454 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 WSB1Q9Y6I7 421 aa8.34□□□□□ -1.07
PDPN-203ENST00000376061 MXRA5Q9NR99 2828 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms