RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 OR4A47Q6IF82 309 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 WDR82Q6UXN9 313 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 DPM3Q9P2X0 92 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 HSPB7Q9UBY9 170 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 IGKV1D-8A0A087WSZ0 117 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 H3BTX0 84 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 FOXH1O75593 365 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 MT-ND6P03923 174 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 ID1P41134 155 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 LY6G6FQ5SQ64 297 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 WDR25Q64LD2 544 aaPredicted RBP11.47□□□□□ -0.57
C9orf47-203ENST00000375851 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.47□□□□□ -0.57
C9orf47-203ENST00000375851 GTF3AQ92664 365 aaKnown RBP11.47□□□□□ -0.57
C9orf47-203ENST00000375851 MARVELD3Q96A59 401 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 TRAV30A0A087WSZ9 112 aa11.46□□□□□ -0.57
C9orf47-203ENST00000375851 TRAV24A0A0B4J272 114 aa11.46□□□□□ -0.57
C9orf47-203ENST00000375851 NPIPB11E5RHQ5 1161 aa11.46□□□□□ -0.57
C9orf47-203ENST00000375851 EGR1P18146 543 aa11.46□□□□□ -0.57
C9orf47-203ENST00000375851 PDLIM4P50479 330 aa11.46□□□□□ -0.57
C9orf47-203ENST00000375851 MEF2CQ06413 473 aaPredicted RBP11.46□□□□□ -0.57
C9orf47-203ENST00000375851 ZCCHC24Q8N2G6 241 aaKnown RBP11.46□□□□□ -0.57
C9orf47-203ENST00000375851 TMEM56-RWDD3S4R434 201 aa11.46□□□□□ -0.57
C9orf47-203ENST00000375851 IGHV3-35A0A0C4DH35 117 aa11.46□□□□□ -0.57
C9orf47-203ENST00000375851 RRHO14718 337 aa11.46□□□□□ -0.57
C9orf47-203ENST00000375851 TFPI2P48307 235 aa11.46□□□□□ -0.57
C9orf47-203ENST00000375851 ZNF343Q6P1L6 599 aa11.46□□□□□ -0.57
C9orf47-203ENST00000375851 C16orf92Q96LL3 132 aa11.46□□□□□ -0.57
C9orf47-203ENST00000375851 MRPL37Q9BZE1 423 aaKnown RBP11.46□□□□□ -0.57
C9orf47-203ENST00000375851 MPDZO75970 2070 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 A0A087X0M5 115 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 A0A1B0GX30 115 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 FOXF2Q12947 444 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 LY6EQ16553 131 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 MAP1LC3CQ9BXW4 147 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 TMEM189A5PLL7 270 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 AGAP20933 346 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 Q6ZN92 141 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 SGK494Q96LW2 274 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 RNF126Q9BV68 326 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 NPCDR1Q9BY65 106 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 FBXL15Q9H469 300 aa11.46□□□□□ -0.58
C9orf47-203ENST00000375851 TMEM250H0YL14 139 aa11.45□□□□□ -0.58
C9orf47-203ENST00000375851 MGPP08493 103 aa11.45□□□□□ -0.58
C9orf47-203ENST00000375851 A0A1W2PS18 150 aa11.45□□□□□ -0.58
C9orf47-203ENST00000375851 ZNF98A6NK75 572 aa11.45□□□□□ -0.58
C9orf47-203ENST00000375851 MOSP00540 346 aa11.45□□□□□ -0.58
C9orf47-203ENST00000375851 GCHFRP30047 84 aa11.45□□□□□ -0.58
C9orf47-203ENST00000375851 LINC00312Q9Y6C7 94 aa11.45□□□□□ -0.58
C9orf47-203ENST00000375851 CCL3L1P16619 93 aa11.45□□□□□ -0.58
C9orf47-203ENST00000375851 Q1RN00 199 aa11.45□□□□□ -0.58
C9orf47-203ENST00000375851 RNF151Q2KHN1 245 aa11.45□□□□□ -0.58
C9orf47-203ENST00000375851 IGHV3OR16-10A0A075B7F0 116 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 RPL7P18124 248 aaKnown RBP11.44□□□□□ -0.58
C9orf47-203ENST00000375851 ZNF385CQ66K41 422 aaPredicted RBP11.44□□□□□ -0.58
C9orf47-203ENST00000375851 PTPRDP23468 1912 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.44□□□□□ -0.58
C9orf47-203ENST00000375851 IGHV1-18A0A0C4DH31 117 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 CXorf65A6NEN9 183 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 CGB1A6NKQ9 187 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 TFF1P04155 84 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 IL6RP08887 468 aaPredicted RBP11.44□□□□□ -0.58
C9orf47-203ENST00000375851 NAT1P18440 290 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 SLC25A33Q9BSK2 321 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 TGIF2-C20orf24A0A0A6YYL0 155 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 VN1R17PQ8TDU5 208 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 IFI27L2Q9H2X8 130 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 H0YIZ8 118 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 G0S2P27469 103 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 ZNF506Q5JVG8 444 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 ZNF497Q6ZNH5 498 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 NEU4Q8WWR8 484 aaPredicted RBP11.44□□□□□ -0.58
C9orf47-203ENST00000375851 RAXQ9Y2V3 346 aa11.44□□□□□ -0.58
C9orf47-203ENST00000375851 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.43□□□□□ -0.58
C9orf47-203ENST00000375851 SPACA3Q8IXA5 215 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 ZNF383Q8NA42 475 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 MRPL32Q9BYC8 188 aaKnown RBP11.43□□□□□ -0.58
C9orf47-203ENST00000375851 MRPL20Q9BYC9 149 aaKnown RBP11.43□□□□□ -0.58
C9orf47-203ENST00000375851 CLDN16Q9Y5I7 305 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 IL4P05112 153 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 GGACTQ9BVM4 153 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 PAM16Q9Y3D7 125 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 HLA-DQA1P01909 254 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 TMEM177Q53S58 311 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 TMEM97Q5BJF2 176 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 ZNF738Q8NE65 137 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 OR8A1Q8NGG7 326 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 OR10J6PQ8NGY7 276 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 RNASE6Q93091 150 aaKnown RBP11.43□□□□□ -0.58
C9orf47-203ENST00000375851 SCN8AQ9UQD0 1980 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 C5orf63A6NC05 138 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 YPEL1O60688 119 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 MPZP25189 248 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 TM4SF20Q53R12 229 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 YPEL2Q96QA6 119 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 BET1LQ9NYM9 111 aa11.43□□□□□ -0.58
C9orf47-203ENST00000375851 ZFHX2Q9C0A1 2572 aaPredicted RBP11.43□□□□□ -0.58
C9orf47-203ENST00000375851 SHANK1Q9Y566 2161 aa11.42□□□□□ -0.58
C9orf47-203ENST00000375851 TFF3Q07654 80 aa11.42□□□□□ -0.58
C9orf47-203ENST00000375851 SSBP3Q9BWW4 388 aaPredicted RBP11.42□□□□□ -0.58
C9orf47-203ENST00000375851 HSPB8Q9UJY1 196 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms