RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 OR51S1Q8NGJ8 323 aa12.35□□□□□ -0.43
C11orf88-202ENST00000375618 OR4A5Q8NH83 315 aa12.35□□□□□ -0.43
C11orf88-202ENST00000375618 TMEM68Q96MH6 324 aa12.35□□□□□ -0.43
C11orf88-202ENST00000375618 FYTTD1Q96QD9 318 aaKnown RBP12.35□□□□□ -0.43
C11orf88-202ENST00000375618 RTBDNQ9BSG5 229 aaPredicted RBP12.35□□□□□ -0.43
C11orf88-202ENST00000375618 SRRQ9GZT4 340 aa12.35□□□□□ -0.43
C11orf88-202ENST00000375618 ZNF355PQ9NSJ1 428 aa12.35□□□□□ -0.43
C11orf88-202ENST00000375618 COA4Q9NYJ1 87 aa12.35□□□□□ -0.43
C11orf88-202ENST00000375618 NDUFA13Q9P0J0 144 aa12.35□□□□□ -0.43
C11orf88-202ENST00000375618 NSG2Q9Y328 171 aa12.35□□□□□ -0.43
C11orf88-202ENST00000375618 DBX1A6NMT0 343 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 H3BUA1 57 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 CTSDP07339 412 aaPredicted RBP12.34□□□□□ -0.43
C11orf88-202ENST00000375618 LGALS1P09382 135 aaKnown RBP12.34□□□□□ -0.43
C11orf88-202ENST00000375618 PTBP1P26599 531 aaKnown RBP eCLIP12.34□□□□□ -0.43
C11orf88-202ENST00000375618 MAS1LP35410 378 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 SP6Q3SY56 376 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 TTC9CQ8N5M4 171 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 DMBX1Q8NFW5 382 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 OR1N2Q8NGR9 330 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 ZNF486Q96H40 463 aaPredicted RBP12.34□□□□□ -0.43
C11orf88-202ENST00000375618 SEC22AQ96IW7 307 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 SDHCQ99643 169 aaPredicted RBP12.34□□□□□ -0.43
C11orf88-202ENST00000375618 SPIN2AQ99865 258 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 SPIN2BQ9BPZ2 258 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 C5orf66Q9H5L9 145 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 SLA2Q9H6Q3 261 aa12.34□□□□□ -0.43
C11orf88-202ENST00000375618 NOTCH1P46531 2555 aa12.33□□□□□ -0.43
C11orf88-202ENST00000375618 IGHV4OR15-8A0A075B7B6 117 aa12.33□□□□□ -0.44
C11orf88-202ENST00000375618 A0A087WW49 117 aa12.33□□□□□ -0.44
C11orf88-202ENST00000375618 DISC1C4P0D8 188 aa12.33□□□□□ -0.44
C11orf88-202ENST00000375618 BRI3O95415 125 aa12.33□□□□□ -0.44
C11orf88-202ENST00000375618 PRB2P02812 416 aaPredicted RBP12.33□□□□□ -0.44
C11orf88-202ENST00000375618 RAB25P57735 213 aa12.33□□□□□ -0.44
C11orf88-202ENST00000375618 IZUMO4Q1ZYL8 232 aa12.33□□□□□ -0.44
C11orf88-202ENST00000375618 Q8N402 240 aa12.33□□□□□ -0.44
C11orf88-202ENST00000375618 AIFM2Q9BRQ8 373 aa12.33□□□□□ -0.44
C11orf88-202ENST00000375618 FAM212BQ9NTI7 297 aaPredicted RBP12.33□□□□□ -0.44
C11orf88-202ENST00000375618 SLC2A8Q9NY64 477 aa12.33□□□□□ -0.44
C11orf88-202ENST00000375618 GPR132Q9UNW8 380 aa12.33□□□□□ -0.44
C11orf88-202ENST00000375618 TRBV9A0A0B4J1U6 114 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 IGLC7A0M8Q6 106 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 A6NHS1 94 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 H0Y980 276 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 TRBV12-3P01733 135 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 REG1AP05451 166 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 S100GP29377 79 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 SLURP1P55000 103 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 ERVK-16P61578 105 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 BAK1Q16611 211 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 OR10W1Q8NGF6 305 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 ZFAND1Q8TCF1 268 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 AKIP1Q9NQ31 210 aa12.32□□□□□ -0.44
C11orf88-202ENST00000375618 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
C11orf88-202ENST00000375618 C3orf85A0A1B0GTC6 90 aa12.31□□□□□ -0.44
C11orf88-202ENST00000375618 TEX50A0A1B0GTY4 177 aa12.31□□□□□ -0.44
C11orf88-202ENST00000375618 IGKV1-5P01602 117 aa12.31□□□□□ -0.44
C11orf88-202ENST00000375618 P0C879 139 aa12.31□□□□□ -0.44
C11orf88-202ENST00000375618 ZNF616Q08AN1 781 aa12.31□□□□□ -0.44
C11orf88-202ENST00000375618 TMEM230Q96A57 120 aa12.31□□□□□ -0.44
C11orf88-202ENST00000375618 RCC1LQ96I51 464 aaKnown RBP12.31□□□□□ -0.44
C11orf88-202ENST00000375618 FANCD2OSQ96PS1 177 aa12.31□□□□□ -0.44
C11orf88-202ENST00000375618 MCUBQ9NWR8 336 aa12.31□□□□□ -0.44
C11orf88-202ENST00000375618 COPZ2Q9P299 210 aa12.31□□□□□ -0.44
C11orf88-202ENST00000375618 DMRT1Q9Y5R6 373 aa12.31□□□□□ -0.44
C11orf88-202ENST00000375618 A0A0G2JRQ6 117 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 NPIPB5A8MRT5 1133 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 WIPF1O43516 503 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 CRYGCP07315 174 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 CTRB1P17538 263 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 PSMB6P28072 239 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 CD40LGP29965 261 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 HOXD3P31249 432 aaPredicted RBP12.3□□□□□ -0.44
C11orf88-202ENST00000375618 KRTAP10-11P60412 298 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 RHOGP84095 191 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 SURF2Q15527 256 aaPredicted RBP12.3□□□□□ -0.44
C11orf88-202ENST00000375618 SPANXN2Q5MJ10 180 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 CTRB2Q6GPI1 263 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 CADM3Q8N126 398 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 LHFPL5Q8TAF8 219 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 DCUN1D4Q92564 292 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 DLX4Q92988 240 aaPredicted RBP12.3□□□□□ -0.44
C11orf88-202ENST00000375618 PRRT1Q99946 306 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 ZNF257Q9Y2Q1 563 aa12.3□□□□□ -0.44
C11orf88-202ENST00000375618 ANKRD34BA5PLL1 514 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 OR2J3O76001 311 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 SERPINE2P07093 398 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 FGF2P09038 288 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 OR5AC1P0C628 307 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 UCP1P25874 307 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 WT1-ASQ06250 92 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 KLK9Q2XQG4 91 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 ZNF343Q6P1L6 599 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 TOMM5Q8N4H5 51 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 GDPD1Q8N9F7 314 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 CCDC71LQ8N9Z2 235 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 COMMD5Q9GZQ3 224 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 NDUFA4L2Q9NRX3 87 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 TMEM14BQ9NUH8 114 aa12.29□□□□□ -0.44
C11orf88-202ENST00000375618 KLK9Q9UKQ9 250 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms