RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CEACAM5P06731 702 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 WDR82Q6UXN9 313 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 SFXN3Q9BWM7 321 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 IGLV3-16A0A075B6K0 115 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 C1orf194Q5T5A4 169 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 FBLIM1Q8WUP2 373 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 NPIPB4C9JG80 1138 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 S100A7L2Q5SY68 101 aa13.13□□□□□ -0.31
COL5A1-201ENST00000371817 RPP21Q9H633 154 aaKnown RBP13.13□□□□□ -0.31
COL5A1-201ENST00000371817 TBX6O95947 436 aaPredicted RBP13.13□□□□□ -0.31
COL5A1-201ENST00000371817 CHCHD1Q96BP2 118 aaKnown RBP13.13□□□□□ -0.31
COL5A1-201ENST00000371817 HCP5Q6MZN7 132 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 PRRT4C9JH25 899 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 UMODP07911 640 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 LINC00305Q7Z4B0 112 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 NRAPQ86VF7 1730 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 DCAF10Q5QP82 559 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 HIST3H2BBQ8N257 126 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
COL5A1-201ENST00000371817 SDF2L1Q9HCN8 221 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 FSCN3Q9NQT6 498 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 ERG28Q9UKR5 140 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 CEACAM21Q3KPI0 293 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 NPCDR1Q9BY65 106 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 M0R2P5 195 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 PSG1P11464 419 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 HMGA1P17096 107 aaKnown RBP13.12□□□□□ -0.31
COL5A1-201ENST00000371817 HEXA-AS1Q9H8Q6 139 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 RNF7Q9UBF6 113 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 KLF12Q9Y4X4 402 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 TET1Q8NFU7 2136 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 SCO2A0A1W2PP80 73 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 ZNF708P17019 499 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 UCP3P55916 312 aa13.12□□□□□ -0.31
COL5A1-201ENST00000371817 EGR1P18146 543 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 PLAURQ03405 335 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 TNFRSF18Q9Y5U5 241 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 TNCP24821 2201 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 LMO7DNF2Z398 122 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 TRAV2A0A0B4J234 112 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 HSPE1P61604 102 aaKnown RBP13.11□□□□□ -0.31
COL5A1-201ENST00000371817 ELSPBP1Q96BH3 223 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 PLPPR1Q8TBJ4 325 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 RNF186Q9NXI6 227 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 MKRN2OSH3BPM6 223 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 HBDP02042 147 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 IL11RAQ14626 422 aa13.11□□□□□ -0.31
COL5A1-201ENST00000371817 SIRT4Q9Y6E7 314 aaPredicted RBP13.11□□□□□ -0.31
COL5A1-201ENST00000371817 IGHV3OR15-7A0A075B7D8 119 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 DIRC2Q96SL1 478 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 ZG16O60844 167 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 ZNF658BQ4V348 819 aaPredicted RBP13.1□□□□□ -0.31
COL5A1-201ENST00000371817 LHX8Q68G74 356 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 LPAR2Q9HBW0 351 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 LOXL2Q9Y4K0 774 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 MOSP00540 346 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 GTF3AQ92664 365 aaKnown RBP13.1□□□□□ -0.31
COL5A1-201ENST00000371817 CD200R1LQ6Q8B3 271 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 GATAD1Q8WUU5 269 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 SPSB2Q99619 263 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 IGKCP01834 107 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 ZNF146Q15072 292 aa13.1□□□□□ -0.31
COL5A1-201ENST00000371817 MARS2Q96GW9 593 aaKnown RBP13.1□□□□□ -0.31
COL5A1-201ENST00000371817 CNOT1A5YKK6 2376 aaKnown RBP13.1□□□□□ -0.31
COL5A1-201ENST00000371817 RND2P52198 227 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 TRPM3Q9HCF6 1732 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-201ENST00000371817 A0A1W2PQD3 144 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 M0R381 172 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 DEFB109BQ30KR1 87 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 DPH3Q96FX2 82 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 CEACAM4O75871 244 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 LAMTOR1Q6IAA8 161 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 PRSS41Q7RTY9 318 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 SPEM1Q8N4L4 309 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 IGHV1-69-2A0A0G2JMI3 117 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 TMEM187Q14656 261 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 BTAF1O14981 1849 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 CXCL16Q9H2A7 254 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 CT62P0C5K7 136 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 ASIPP42127 132 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 STARD6P59095 220 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 KIAA1551Q9HCM1 1747 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 RBBP6Q7Z6E9 1792 aaKnown RBP13.09□□□□□ -0.31
COL5A1-201ENST00000371817 TRBV5-5A0A0J9YX44 114 aa13.09□□□□□ -0.31
COL5A1-201ENST00000371817 FOXI3A8MTJ6 420 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-201ENST00000371817 CACNA1EQ15878 2313 aa13.08□□□□□ -0.31
COL5A1-201ENST00000371817 SPINK2P20155 84 aa13.08□□□□□ -0.31
COL5A1-201ENST00000371817 RPL23P62829 140 aaKnown RBP13.08□□□□□ -0.31
COL5A1-201ENST00000371817 GLRX5Q86SX6 157 aa13.08□□□□□ -0.31
COL5A1-201ENST00000371817 KLHDC2Q9Y2U9 406 aa13.08□□□□□ -0.31
COL5A1-201ENST00000371817 SAA1P0DJI8 122 aaPredicted RBP13.08□□□□□ -0.32
COL5A1-201ENST00000371817 ZNF415Q09FC8 603 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 SLC25A53Q5H9E4 307 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 FAM181AQ8N9Y4 354 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 TRAV17A0A0B4J275 112 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 PRDM14Q9GZV8 571 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 CXorf51AA0A1B0GTR3 108 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 CGAP01215 116 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 AMBPP02760 352 aa13.08□□□□□ -0.32
COL5A1-201ENST00000371817 TNFSF15O95150 251 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms