RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 RCC1LQ96I51 464 aaKnown RBP17.36■□□□□ 0.37
ECHDC1-203ENST00000368291 THAP7Q9BT49 309 aaPredicted RBP17.36■□□□□ 0.37
ECHDC1-203ENST00000368291 NDUFA13Q9P0J0 144 aa17.36■□□□□ 0.37
ECHDC1-203ENST00000368291 IGKV1-39P01597 117 aa17.35■□□□□ 0.37
ECHDC1-203ENST00000368291 IGHV3-11P01762 117 aa17.35■□□□□ 0.37
ECHDC1-203ENST00000368291 IGKV1D-39P04432 117 aa17.35■□□□□ 0.37
ECHDC1-203ENST00000368291 PTBP1P26599 531 aaKnown RBP eCLIP17.35■□□□□ 0.375e-10■■■■□ 20.2
ECHDC1-203ENST00000368291 G6PCP35575 357 aa17.35■□□□□ 0.37
ECHDC1-203ENST00000368291 PIGPP57054 158 aa17.35■□□□□ 0.37
ECHDC1-203ENST00000368291 DEFA5Q01523 94 aa17.35■□□□□ 0.37
ECHDC1-203ENST00000368291 TTC9CQ8N5M4 171 aa17.35■□□□□ 0.37
ECHDC1-203ENST00000368291 OR13C8Q8NGS7 320 aa17.35■□□□□ 0.37
ECHDC1-203ENST00000368291 COA4Q9NYJ1 87 aa17.35■□□□□ 0.37
ECHDC1-203ENST00000368291 DISC1C4P0D8 188 aa17.34■□□□□ 0.37
ECHDC1-203ENST00000368291 KRASP01116 189 aa17.34■□□□□ 0.37
ECHDC1-203ENST00000368291 ETV6P41212 452 aa17.34■□□□□ 0.37
ECHDC1-203ENST00000368291 ZNF616Q08AN1 781 aa17.34■□□□□ 0.37
ECHDC1-203ENST00000368291 CADM3Q8N126 398 aa17.34■□□□□ 0.37
ECHDC1-203ENST00000368291 OR6Q1Q8NGQ2 317 aa17.34■□□□□ 0.37
ECHDC1-203ENST00000368291 OR1N2Q8NGR9 330 aa17.34■□□□□ 0.37
ECHDC1-203ENST00000368291 PRH1P02810 166 aa17.33■□□□□ 0.36
ECHDC1-203ENST00000368291 FGF2P09038 288 aa17.33■□□□□ 0.36
ECHDC1-203ENST00000368291 OR2B8PP59922 312 aa17.33■□□□□ 0.36
ECHDC1-203ENST00000368291 ZNF45Q02386 682 aa17.33■□□□□ 0.36
ECHDC1-203ENST00000368291 PYDC2Q56P42 97 aa17.33■□□□□ 0.36
ECHDC1-203ENST00000368291 OR51S1Q8NGJ8 323 aa17.33■□□□□ 0.36
ECHDC1-203ENST00000368291 ZFAND1Q8TCF1 268 aa17.33■□□□□ 0.36
ECHDC1-203ENST00000368291 FYTTD1Q96QD9 318 aaKnown RBP17.33■□□□□ 0.36
ECHDC1-203ENST00000368291 TP53RKQ96S44 253 aa17.33■□□□□ 0.36
ECHDC1-203ENST00000368291 SLC2A8Q9NY64 477 aa17.33■□□□□ 0.36
ECHDC1-203ENST00000368291 IGHV4OR15-8A0A075B7B6 117 aa17.32■□□□□ 0.36
ECHDC1-203ENST00000368291 A0A087WW49 117 aa17.32■□□□□ 0.36
ECHDC1-203ENST00000368291 CTSDP07339 412 aaPredicted RBP17.32■□□□□ 0.36
ECHDC1-203ENST00000368291 RAB25P57735 213 aa17.32■□□□□ 0.36
ECHDC1-203ENST00000368291 ERVK-16P61578 105 aa17.32■□□□□ 0.36
ECHDC1-203ENST00000368291 C19orf35Q6ZS72 473 aa17.32■□□□□ 0.36
ECHDC1-203ENST00000368291 Q8N402 240 aa17.32■□□□□ 0.36
ECHDC1-203ENST00000368291 SEC22AQ96IW7 307 aa17.32■□□□□ 0.36
ECHDC1-203ENST00000368291 RTBDNQ9BSG5 229 aaPredicted RBP17.32■□□□□ 0.36
ECHDC1-203ENST00000368291 TRBV9A0A0B4J1U6 114 aa17.31■□□□□ 0.36
ECHDC1-203ENST00000368291 H0Y980 276 aa17.31■□□□□ 0.36
ECHDC1-203ENST00000368291 DUS4LO95620 317 aaKnown RBP17.31■□□□□ 0.36
ECHDC1-203ENST00000368291 AREGP15514 252 aa17.31■□□□□ 0.36
ECHDC1-203ENST00000368291 KLF9Q13886 244 aaPredicted RBP17.31■□□□□ 0.36
ECHDC1-203ENST00000368291 PRRT1Q99946 306 aa17.31■□□□□ 0.36
ECHDC1-203ENST00000368291 GPR132Q9UNW8 380 aa17.31■□□□□ 0.36
ECHDC1-203ENST00000368291 NPIPB5A8MRT5 1133 aa17.3■□□□□ 0.36
ECHDC1-203ENST00000368291 OR8U8P0C7N1 319 aa17.3■□□□□ 0.36
ECHDC1-203ENST00000368291 ECI1P42126 302 aa17.3■□□□□ 0.36
ECHDC1-203ENST00000368291 SURF2Q15527 256 aaPredicted RBP17.3■□□□□ 0.36
ECHDC1-203ENST00000368291 SRRQ9GZT4 340 aa17.3■□□□□ 0.36
ECHDC1-203ENST00000368291 C5orf66Q9H5L9 145 aa17.3■□□□□ 0.36
ECHDC1-203ENST00000368291 ZNF257Q9Y2Q1 563 aa17.3■□□□□ 0.36
ECHDC1-203ENST00000368291 NSG2Q9Y328 171 aa17.3■□□□□ 0.36
ECHDC1-203ENST00000368291 PRKDCP78527 4128 aaKnown RBP17.3■□□□□ 0.36
ECHDC1-203ENST00000368291 A0A0G2JLM5 398 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 C3orf85A0A1B0GTC6 90 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 TEX50A0A1B0GTY4 177 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 IGLC7A0M8Q6 106 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 LINC01619G3V211 115 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 CRYGCP07315 174 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 CTRB1P17538 263 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 CTRB2Q6GPI1 263 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 SLC25A42Q86VD7 318 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 COMMD5Q9GZQ3 224 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 AKIP1Q9NQ31 210 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 COPZ2Q9P299 210 aa17.29■□□□□ 0.36
ECHDC1-203ENST00000368291 C13orf42A0A1B0GVH6 325 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 DBX1A6NMT0 343 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 HSPB1P04792 205 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 PSMB6P28072 239 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 SLURP1P55000 103 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 RHOGP84095 191 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 SP6Q3SY56 376 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 SPANXN2Q5MJ10 180 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 ZNF343Q6P1L6 599 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 CCDC71LQ8N9Z2 235 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 DCUN1D4Q92564 292 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 DPF1Q92782 380 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 USMG5Q96IX5 58 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 FANCD2OSQ96PS1 177 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 MCRIP2Q9BUT9 160 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 WIPF1O43516 503 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 PRB2P02812 416 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 REG1AP05451 166 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 SERPINE2P07093 398 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 KLK9Q2XQG4 91 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 GDPD1Q8N9F7 314 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 OR10W1Q8NGF6 305 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 DLX4Q92988 240 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 QTRT1Q9BXR0 403 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 MCUBQ9NWR8 336 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 KLK9Q9UKQ9 250 aa17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 C14orf166Q9Y224 244 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-203ENST00000368291 FAM223BA6NKX1 122 aa17.27■□□□□ 0.35
ECHDC1-203ENST00000368291 TRBV12-3P01733 135 aa17.27■□□□□ 0.35
ECHDC1-203ENST00000368291 UCP1P25874 307 aa17.27■□□□□ 0.35
ECHDC1-203ENST00000368291 FAM223AQ8IWN6 122 aa17.27■□□□□ 0.35
ECHDC1-203ENST00000368291 TOMM5Q8N4H5 51 aa17.27■□□□□ 0.35
ECHDC1-203ENST00000368291 OR1L8Q8NGR8 309 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms