RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 KCNIP4Q6PIL6 250 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 IGFL2Q6UWQ7 119 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 BHLHA15Q7RTS1 189 aaPredicted RBP12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 ASCL3Q9NQ33 180 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 CHTOPQ9Y3Y2 248 aaKnown RBP12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 SMG1Q96Q15 3661 aaKnown RBP12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 A0A0U1RQK1 487 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 ZNF320A2RRD8 509 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 C1QTNF9P0C862 333 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 ZNF83P51522 516 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 CR1LQ2VPA4 569 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 SEM1Q6ZVN7 128 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 MOGAT3Q86VF5 341 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 RAB1CQ92928 201 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 OR2V2Q96R30 315 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 TMEM140Q9NV12 185 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 SLC25A15Q9Y619 301 aa12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 EP300Q09472 2414 aaPredicted RBP12.83□□□□□ -0.36
CNKSR1-201ENST00000361530 TRAV17A0A0B4J275 112 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 ARL14EPLP0DKL9 152 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 CISD2Q8N5K1 135 aaKnown RBP12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 S1PR3Q99500 378 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 GGTLC1Q9BX51 225 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 PROCRQ9UNN8 238 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 CACNA1HO95180 2353 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 TRBV20OR9-2A0A075B6H5 130 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 FAM90A9PA6NNJ1 464 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 ZNF705FA8MVS1 300 aaPredicted RBP12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 M0R143 59 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 F2RL2O00254 374 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 PDE6DO43924 150 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 ZNF705DP0CH99 300 aaPredicted RBP12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 ZNF705BP0CI00 300 aaPredicted RBP12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 SRP14P37108 136 aaKnown RBP12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 OPRK1P41145 380 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 TMEM249Q2WGJ8 235 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 GBGT1Q8N5D6 347 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 TRAPPC1Q9Y5R8 145 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 PXMP4Q9Y6I8 212 aa12.82□□□□□ -0.36
CNKSR1-201ENST00000361530 TYMSP04818 313 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 ERVK-16P61578 105 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 TMEM256Q8N2U0 113 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 OR52E5Q8NH55 327 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 SSMEM1Q8WWF3 244 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 DDB2Q92466 427 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 TCF19Q9Y242 345 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 TMPRSS2O15393 492 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 RBFOX2O43251 390 aaKnown RBP eCLIP12.81□□□□□ -0.361e-9■■■■■ 33.1
CNKSR1-201ENST00000361530 MPDU1O75352 247 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 ZNF25P17030 456 aaPredicted RBP12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 IL3RAP26951 378 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 RPL29P47914 159 aaKnown RBP12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 TMPRSS3P57727 454 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 ERVFC1-1P60608 527 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 PDLIM3Q53GG5 364 aaPredicted RBP12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 DUX4L9Q6RFH8 374 aaPredicted RBP12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 KCNIP2Q9NS61 270 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 CALYQ9NYX4 217 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 DMXL1Q9Y485 3027 aa12.81□□□□□ -0.36
CNKSR1-201ENST00000361530 SPRY3O43610 288 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 STAG3L2P0CL84 134 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 STAG3L3P0CL85 134 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 CGB3P0DN86 165 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 CGB7P0DN87 165 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 CT45A1Q5HYN5 189 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 VHLLQ6RSH7 139 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 CT45A3Q8NHU0 189 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 GOLT1BQ9Y3E0 138 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 DSCAMO60469 2012 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 SPAARA0A1B0GVQ0 90 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 MYOD1P15172 320 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 CFHR2P36980 270 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 MZT1Q08AG7 82 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 C17orf58Q2M2W7 97 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 ZNF705AQ6ZN79 300 aaPredicted RBP12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 MS4A10Q96PG2 267 aa12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 POLR3KQ9Y2Y1 108 aaPredicted RBP12.8□□□□□ -0.36
CNKSR1-201ENST00000361530 AHRRA9YTQ3 701 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 M0R1B8 84 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 NPSP0C0P6 89 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 ARSJQ5FYB0 599 aaPredicted RBP12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 SPATA31B1PQ5VZV4 182 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 PPP1R35Q8TAP8 253 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 NAGKQ9UJ70 344 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 LSM4Q9Y4Z0 139 aaKnown RBP12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 SCO2A0A1W2PP80 73 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 LHBP01229 141 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 CD33P20138 364 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 TMEM144Q7Z5S9 345 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 DEFB124Q8NES8 71 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 SEPSECSQ9HD40 501 aaKnown RBP12.79□□□□□ -0.36
CNKSR1-201ENST00000361530 NUPR1O60356 82 aa12.78□□□□□ -0.36
CNKSR1-201ENST00000361530 HNF1AP20823 631 aa12.78□□□□□ -0.36
CNKSR1-201ENST00000361530 MRPS11P82912 194 aaKnown RBP12.78□□□□□ -0.36
CNKSR1-201ENST00000361530 DEFB109BQ30KR1 87 aa12.78□□□□□ -0.36
CNKSR1-201ENST00000361530 RPRMLQ8N4K4 120 aa12.78□□□□□ -0.36
CNKSR1-201ENST00000361530 YTHDF2Q9Y5A9 579 aaKnown RBP12.78□□□□□ -0.36
CNKSR1-201ENST00000361530 CNOT1A5YKK6 2376 aaKnown RBP12.78□□□□□ -0.36
CNKSR1-201ENST00000361530 SAA2-SAA4A0A096LPE2 208 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms