RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 NPIPB3Q92617 1050 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 ETV2O00321 342 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-201ENST00000360565 NUBP1P53384 320 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 KIAA1644Q3SXP7 199 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 OR4C13Q8NGP0 309 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 SGK494Q96LW2 274 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 CD59P13987 128 aa13.72□□□□□ -0.21
SCAF1-201ENST00000360565 FAM122AQ96E09 287 aa13.72□□□□□ -0.21
SCAF1-201ENST00000360565 SDF2L1Q9HCN8 221 aa13.72□□□□□ -0.21
SCAF1-201ENST00000360565 LILRA1O75019 489 aa13.72□□□□□ -0.21
SCAF1-201ENST00000360565 NHLH1Q02575 133 aa13.72□□□□□ -0.21
SCAF1-201ENST00000360565 PCSK4Q6UW60 755 aa13.72□□□□□ -0.21
SCAF1-201ENST00000360565 C11orf42Q8N5U0 333 aa13.72□□□□□ -0.21
SCAF1-201ENST00000360565 TMSB15BA0A087X1C1 80 aa13.72□□□□□ -0.21
SCAF1-201ENST00000360565 OR5AL1P0C617 328 aa13.72□□□□□ -0.21
SCAF1-201ENST00000360565 ZNF146Q15072 292 aa13.72□□□□□ -0.21
SCAF1-201ENST00000360565 HIGD1AQ9Y241 93 aa13.72□□□□□ -0.21
SCAF1-201ENST00000360565 GRIFINA4D1Z8 144 aa13.71□□□□□ -0.21
SCAF1-201ENST00000360565 IL18BPO95998 194 aa13.71□□□□□ -0.21
SCAF1-201ENST00000360565 IL6RP08887 468 aaPredicted RBP13.71□□□□□ -0.21
SCAF1-201ENST00000360565 ISLRO14498 428 aa13.71□□□□□ -0.21
SCAF1-201ENST00000360565 OR4A47Q6IF82 309 aa13.71□□□□□ -0.21
SCAF1-201ENST00000360565 SSX8Q7RTT4 187 aa13.71□□□□□ -0.21
SCAF1-201ENST00000360565 C5orf17Q8NAS9 161 aa13.71□□□□□ -0.21
SCAF1-201ENST00000360565 SFRP2Q96HF1 295 aa13.71□□□□□ -0.21
SCAF1-201ENST00000360565 MRPL18Q9H0U6 180 aaKnown RBP13.71□□□□□ -0.21
SCAF1-201ENST00000360565 C1RLQ9NZP8 487 aa13.71□□□□□ -0.21
SCAF1-201ENST00000360565 MT-ND6P03923 174 aa13.71□□□□□ -0.22
SCAF1-201ENST00000360565 ATP5G3P48201 142 aa13.71□□□□□ -0.22
SCAF1-201ENST00000360565 DIRC3C9JPN6 131 aa13.71□□□□□ -0.22
SCAF1-201ENST00000360565 SS18L1O75177 396 aaPredicted RBP13.71□□□□□ -0.22
SCAF1-201ENST00000360565 CSRP2Q16527 193 aa13.71□□□□□ -0.22
SCAF1-201ENST00000360565 FOXL2NBQ6ZUU3 175 aa13.71□□□□□ -0.22
SCAF1-201ENST00000360565 H3BTX0 84 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 PSPNO60542 156 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 VENTXO95231 258 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 CD40P25942 277 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 LGALS7P47929 136 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 NMSQ5H8A3 153 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 DOLPP1Q86YN1 238 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 OR9G1Q8NH87 305 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 PRR7Q8TB68 274 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 YTHDF2Q9Y5A9 579 aaKnown RBP13.7□□□□□ -0.22
SCAF1-201ENST00000360565 A0A087WWC5 75 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 A8MWL6 223 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 RNF151Q2KHN1 245 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 DNM1P46Q6ZS02 220 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 PRNTQ86SH4 94 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 KBTBD11-OT1A0A1B0GTJ5 212 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 OR2J3O76001 311 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 IGFBP2P18065 325 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 VSIRQ9H7M9 311 aa13.7□□□□□ -0.22
SCAF1-201ENST00000360565 COLCA2A8K830 154 aa13.69□□□□□ -0.22
SCAF1-201ENST00000360565 OR51G1Q8NGK1 321 aa13.69□□□□□ -0.22
SCAF1-201ENST00000360565 GATAD1Q8WUU5 269 aa13.69□□□□□ -0.22
SCAF1-201ENST00000360565 LPAR2Q9HBW0 351 aa13.69□□□□□ -0.22
SCAF1-201ENST00000360565 ERVFRD-1P60508 538 aa13.69□□□□□ -0.22
SCAF1-201ENST00000360565 PAFAH1B2P68402 229 aa13.69□□□□□ -0.22
SCAF1-201ENST00000360565 GTF3C1Q12789 2109 aa13.69□□□□□ -0.22
SCAF1-201ENST00000360565 TMEM171Q8WVE6 324 aa13.69□□□□□ -0.22
SCAF1-201ENST00000360565 CGAP01215 116 aa13.69□□□□□ -0.22
SCAF1-201ENST00000360565 GCGP01275 180 aa13.69□□□□□ -0.22
SCAF1-201ENST00000360565 CBLN1P23435 193 aa13.69□□□□□ -0.22
SCAF1-201ENST00000360565 NDUFA2O43678 99 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 DDTP30046 118 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 RIGQ13278 110 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 AUP1Q9Y679 476 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 ATXN7O15265 892 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-201ENST00000360565 FOXF2Q12947 444 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 TMEM186Q96B77 213 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 HS3ST6Q96QI5 342 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 NAGKQ9UJ70 344 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 ORM1P02763 201 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 CENPWQ5EE01 88 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 TMEM191AQ9H0A3 160 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 TCAPO15273 167 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 GATA2P23769 480 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-201ENST00000360565 RPL23P62829 140 aaKnown RBP13.68□□□□□ -0.22
SCAF1-201ENST00000360565 PEAR1Q5VY43 1037 aaPredicted RBP13.68□□□□□ -0.22
SCAF1-201ENST00000360565 ZCCHC24Q8N2G6 241 aaKnown RBP13.68□□□□□ -0.22
SCAF1-201ENST00000360565 CLEC5AQ9NY25 188 aa13.68□□□□□ -0.22
SCAF1-201ENST00000360565 HLA-DQA1P01909 254 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 FAM87AP0C7U9 286 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 ARF6P62330 175 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 SCNM1Q9BWG6 230 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 SSBP3Q9BWW4 388 aaPredicted RBP13.67□□□□□ -0.22
SCAF1-201ENST00000360565 DMRT1Q9Y5R6 373 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 CORTO00230 105 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 F2RL2O00254 374 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 SLC17A3O00476 420 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 HOXA5P20719 270 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 GPR6P46095 362 aaPredicted RBP13.67□□□□□ -0.22
SCAF1-201ENST00000360565 MORN2Q502X0 79 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 UBTD1Q9HAC8 227 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 SCO2A0A1W2PP80 73 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 ADCYAP1P18509 176 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 ECSCRQ19T08 205 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 CENPFP49454 3210 aa13.67□□□□□ -0.22
SCAF1-201ENST00000360565 LY6G6EA0A0G2JKS1 128 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 IGKV1-5P01602 117 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms