RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 SYNGR3O43761 229 aa10.38□□□□□ -0.75
CCDC144A-204ENST00000360524 IGKV3-20P01619 116 aa10.38□□□□□ -0.75
CCDC144A-204ENST00000360524 PDLIM4P50479 330 aa10.38□□□□□ -0.75
CCDC144A-204ENST00000360524 FDCSPQ8NFU4 85 aa10.38□□□□□ -0.75
CCDC144A-204ENST00000360524 IGHV1-69-2A0A0G2JMI3 117 aa10.38□□□□□ -0.75
CCDC144A-204ENST00000360524 RRHO14718 337 aa10.38□□□□□ -0.75
CCDC144A-204ENST00000360524 ATP5J2P56134 94 aa10.38□□□□□ -0.75
CCDC144A-204ENST00000360524 NUTF2P61970 127 aaKnown RBP10.38□□□□□ -0.75
CCDC144A-204ENST00000360524 TTC9CQ8N5M4 171 aa10.38□□□□□ -0.75
CCDC144A-204ENST00000360524 STPG3Q8N7X2 389 aa10.38□□□□□ -0.75
CCDC144A-204ENST00000360524 ZNF414Q96IQ9 312 aa10.38□□□□□ -0.75
CCDC144A-204ENST00000360524 TBX6O95947 436 aaPredicted RBP10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 MEF2CQ06413 473 aaPredicted RBP10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 PARP14Q460N5 1801 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 WNT9BO14905 357 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 FOXA3P55318 350 aaPredicted RBP10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 SMAGPQ0VAQ4 97 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 NUDT10Q8NFP7 164 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 CCL19Q99731 98 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 C8orf88P0DMB2 117 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 PSG9Q00887 426 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 UNQ9370/PRO34162Q6UXP9 181 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 LINC00470Q9BZP3 86 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 PRDM13Q9H4Q3 707 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 MUC21A0A0G2JKD1 596 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 MUC21A0A140T8X8 626 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 SLC17A3O00476 420 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 PTGDSP41222 190 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 SRSF3P84103 164 aaKnown RBP10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 MUC21Q5SSG8 566 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 OR9G1Q8NH87 305 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 VCX2Q9H322 139 aa10.37□□□□□ -0.75
CCDC144A-204ENST00000360524 IGHV3OR16-13A0A075B7E8 117 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 IGHV3-74A0A0B4J1X5 117 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 B9A039 149 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 DLEU1O43261 78 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 THY1P04216 161 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 TMEM30BQ3MIR4 351 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 SMIM8Q96KF7 97 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 GPR82Q96P67 336 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 J3QW42 95 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 KLF4O43474 513 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 MFAP4P55083 255 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 Q6ZT83 130 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 FAM19A2Q8N3H0 131 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 DRAM1Q8N682 238 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 C5orf30Q96GV9 206 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 TMEM160Q9NX00 188 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 ZNF646O15015 1829 aaPredicted RBP10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 NPIPB13A6NJU9 1138 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 NPIPB4C9JG80 1138 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HSPE1P61604 102 aaKnown RBP10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 EGR4Q05215 589 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 NUP37Q8NFH4 326 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 ZNF703Q9H7S9 590 aaPredicted RBP10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 OR11H12B2RN74 326 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 ZXDCQ2QGD7 858 aaPredicted RBP10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 CENPWQ5EE01 88 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 C1QL2Q7Z5L3 287 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 OR11H1Q8NG94 326 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 OR11H2Q8NH07 326 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 NEUROG1Q92886 237 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 FOXD3Q9UJU5 478 aaPredicted RBP10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HAX1O00165 279 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST1H2BKO60814 126 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST1H2BJP06899 126 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST1H2BOP23527 126 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST1H2BBP33778 126 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST1H2BDP58876 126 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST1H2BCP62807 126 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HBBP68871 147 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 PLAURQ03405 335 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 TFF3Q07654 80 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST2H2BEQ16778 126 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 LINC01590Q5TEZ4 76 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 LINC00305Q7Z4B0 112 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST1H2BHQ93079 126 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 TMEM186Q96B77 213 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 SIGLEC12Q96PQ1 595 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST1H2BNQ99877 126 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST1H2BMQ99879 126 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 NABP2Q9BQ15 211 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 IL36BQ9NZH7 164 aa10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 CHCHD2Q9Y6H1 151 aaPredicted RBP10.36□□□□□ -0.75
CCDC144A-204ENST00000360524 SHISA3A0PJX4 238 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 FAM90A26D6RGX4 464 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 GPX1P07203 203 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 CSRP3P50461 194 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 ZNF56Q15929 161 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 OR5P3Q8WZ94 311 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 NPIPB3Q92617 1050 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 CLEC7AQ9BXN2 247 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 SBF2Q86WG5 1849 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 WNK3Q9BYP7 1800 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 TRAV30A0A087WSZ9 112 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 FOXI3A8MTJ6 420 aaPredicted RBP10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 GPR183P32249 361 aa10.35□□□□□ -0.75
CCDC144A-204ENST00000360524 HIST1H1AQ02539 215 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms