RNA–Protein interactions for RNA: ENST00000357857.14

CLN3-204, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-204ENST00000357857 LY86O95711 162 aa14.99□□□□□ -0.01
CLN3-204ENST00000357857 MOSP00540 346 aa14.99□□□□□ -0.01
CLN3-204ENST00000357857 TGFAP01135 160 aa14.99□□□□□ -0.01
CLN3-204ENST00000357857 MYOD1P15172 320 aa14.99□□□□□ -0.01
CLN3-204ENST00000357857 UBA52P62987 128 aaKnown RBP14.99□□□□□ -0.01
CLN3-204ENST00000357857 BAXQ07812 192 aa14.99□□□□□ -0.01
CLN3-204ENST00000357857 PSG5Q15238 335 aa14.99□□□□□ -0.01
CLN3-204ENST00000357857 SPANXN5Q5MJ07 72 aa14.99□□□□□ -0.01
CLN3-204ENST00000357857 RUSC1-AS1Q66K80 236 aa14.99□□□□□ -0.01
CLN3-204ENST00000357857 STX12Q86Y82 276 aa14.99□□□□□ -0.01
CLN3-204ENST00000357857 CYTL1Q9NRR1 136 aa14.99□□□□□ -0.01
CLN3-204ENST00000357857 J3QLI3 93 aa14.98□□□□□ -0.01
CLN3-204ENST00000357857 SPDEFO95238 335 aa14.98□□□□□ -0.01
CLN3-204ENST00000357857 CRYGBP07316 175 aa14.98□□□□□ -0.01
CLN3-204ENST00000357857 SNRNP70P08621 437 aaKnown RBP14.98□□□□□ -0.01
CLN3-204ENST00000357857 HOXA1P49639 335 aaPredicted RBP14.98□□□□□ -0.01
CLN3-204ENST00000357857 TMEM267Q0VDI3 215 aaPredicted RBP14.98□□□□□ -0.01
CLN3-204ENST00000357857 OR2T10Q8NGZ9 312 aa14.98□□□□□ -0.01
CLN3-204ENST00000357857 OR5B3Q8NH48 314 aa14.98□□□□□ -0.01
CLN3-204ENST00000357857 ZNF430Q9H8G1 570 aaPredicted RBP14.98□□□□□ -0.01
CLN3-204ENST00000357857 TPSG1Q9NRR2 321 aa14.98□□□□□ -0.01
CLN3-204ENST00000357857 TEX50A0A1B0GTY4 177 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 CST7O76096 145 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 CFDP00746 253 aaPredicted RBP14.97□□□□□ -0.01
CLN3-204ENST00000357857 IGHV4-38-2P0DP08 117 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 CD24P25063 80 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 VDAC2P45880 294 aaPredicted RBP14.97□□□□□ -0.01
CLN3-204ENST00000357857 SULT1A1P50225 295 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 HES1Q14469 280 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 ZNF767PQ75MW2 155 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 ZNF680Q8NEM1 530 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 WFDC11Q8NEX6 87 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 ST8SIA2Q92186 375 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 EAF1Q96JC9 268 aaPredicted RBP14.97□□□□□ -0.01
CLN3-204ENST00000357857 FOXC2Q99958 501 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 COMMD5Q9GZQ3 224 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 HIPK2Q9H2X6 1198 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 ENY2Q9NPA8 101 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 METTL1Q9UBP6 276 aaKnown RBP14.97□□□□□ -0.01
CLN3-204ENST00000357857 STRAPQ9Y3F4 350 aaKnown RBP14.97□□□□□ -0.01
CLN3-204ENST00000357857 BRS3P32247 399 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 PRCDQ00LT1 54 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 HNF4GQ14541 408 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 TMEM14EPQ6UXP3 125 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 BRD3OSQ6XYD6 125 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 OR4C12Q96R67 309 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 HINT2Q9BX68 163 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 HEYLQ9NQ87 328 aaPredicted RBP14.97□□□□□ -0.01
CLN3-204ENST00000357857 SIGLEC9Q9Y336 463 aa14.97□□□□□ -0.01
CLN3-204ENST00000357857 MAP1AP78559 2803 aaPredicted RBP14.96□□□□□ -0.01
CLN3-204ENST00000357857 AVPP01185 164 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 IFNA7P01567 189 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 OPN1MWP04001 364 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 METTL15P1P0C7V9 234 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 OPN1MW2P0DN77 364 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 OPN1MW3P0DN78 364 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 DYNLT3P51808 116 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 EBI3Q14213 229 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 MMDQ15546 238 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 MMD2Q8IY49 270 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 TMEM217Q8N7C4 229 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 OR1L8Q8NGR8 309 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 STOML3Q8TAV4 291 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 PLEKHA3Q9HB20 300 aa14.96□□□□□ -0.01
CLN3-204ENST00000357857 RRHO14718 337 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 NBR2O15453 112 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 TPT1P13693 172 aaKnown RBP14.95□□□□□ -0.02
CLN3-204ENST00000357857 F2RL1P55085 397 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 EXOSC2Q13868 293 aaKnown RBP14.95□□□□□ -0.02
CLN3-204ENST00000357857 PRSS8Q16651 343 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 MRGPRG-AS1Q2M3A8 158 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 RPL7L1Q6DKI1 246 aaKnown RBP14.95□□□□□ -0.02
CLN3-204ENST00000357857 THNSL2Q86YJ6 484 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 NPBQ8NG41 125 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 OR1S2Q8NGQ3 325 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 OR5C1Q8NGR4 320 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 FBXL15Q9H469 300 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 WFDC1Q9HC57 220 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 KIAA1456Q9P272 454 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 UNC79Q9P2D8 2635 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 PAIP2BQ9ULR5 123 aaKnown RBP14.95□□□□□ -0.02
CLN3-204ENST00000357857 RPP30P78346 268 aaKnown RBP14.95□□□□□ -0.02
CLN3-204ENST00000357857 PJVKQ0ZLH3 352 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 PLGLAQ15195 96 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 FBLN7Q53RD9 439 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 KLF17Q5JT82 389 aaPredicted RBP14.95□□□□□ -0.02
CLN3-204ENST00000357857 PPP1R27Q86WC6 154 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 Q8N6K4 173 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 NDUFA4L2Q9NRX3 87 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 ITGB1BP2Q9UKP3 347 aa14.95□□□□□ -0.02
CLN3-204ENST00000357857 PLXNB1O43157 2135 aa14.94□□□□□ -0.02
CLN3-204ENST00000357857 JTBO76095 146 aa14.94□□□□□ -0.02
CLN3-204ENST00000357857 NDUFA3O95167 84 aa14.94□□□□□ -0.02
CLN3-204ENST00000357857 FAM106CPP0CH98 169 aa14.94□□□□□ -0.02
CLN3-204ENST00000357857 TMEM11P17152 192 aa14.94□□□□□ -0.02
CLN3-204ENST00000357857 MAS1LP35410 378 aa14.94□□□□□ -0.02
CLN3-204ENST00000357857 EIF5AP63241 154 aaKnown RBP14.94□□□□□ -0.02
CLN3-204ENST00000357857 CLINT1Q14677 625 aa14.94□□□□□ -0.02
CLN3-204ENST00000357857 CYB5R2Q6BCY4 276 aa14.94□□□□□ -0.02
CLN3-204ENST00000357857 UBQLN2Q9UHD9 624 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms