RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 RPL39P5Q59GN2 51 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 CENPWQ5EE01 88 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 OR13A1Q8NGR1 328 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 GATAD1Q8WUU5 269 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 SPSB3Q6PJ21 355 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 C19orf35Q6ZS72 473 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 LEAP2Q969E1 77 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 CCL13Q99616 98 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 NABP2Q9BQ15 211 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 PMCHL1Q16048 86 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 CLEC2AQ6UVW9 174 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 Q6ZS49 121 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 C11orf42Q8N5U0 333 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 ASCL3Q9NQ33 180 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 SLC25A10Q9UBX3 287 aaPredicted RBP12.38□□□□□ -0.43
NUP50-201ENST00000347635 C8orf88P0DMB2 117 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 REG1BP48304 166 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 C5orf24Q7Z6I8 188 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 ITLN1Q8WWA0 313 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 IMMP2LQ96T52 175 aa12.38□□□□□ -0.43
NUP50-201ENST00000347635 SLC17A3O00476 420 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 OR5AL1P0C617 328 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 NBL1P41271 181 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 HGFACQ04756 655 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 KIAA1644Q3SXP7 199 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 NHLRC2Q8NBF2 726 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 C19orf24Q9BVV8 132 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 HERPUD1Q15011 391 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 CCDC144NLQ6NUI1 221 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 PCSK4Q6UW60 755 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 MSRB2Q9Y3D2 182 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 LTBP2Q14767 1821 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 TRAV9-1A0A075B6T8 112 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 DOLPP1Q86YN1 238 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 IDI2-AS1Q9NZ38 188 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 NCBP2LA6PVI3 153 aaKnown RBP12.37□□□□□ -0.43
NUP50-201ENST00000347635 SIAH2O43255 324 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 CA2P00918 260 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 COX7A1P24310 79 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 BMI1P35226 326 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 ATG101Q9BSB4 218 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 THYN1Q9P016 225 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 HSPB7Q9UBY9 170 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
NUP50-201ENST00000347635 AMBPP02760 352 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 HSPB8Q9UJY1 196 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 NOTCH4Q99466 2003 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 PINLYPA6NC86 204 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 HEATR5AQ86XA9 2040 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 LURAP1LQ8IV03 231 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 IQCF6A8MYZ5 107 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 RIGQ13278 110 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 ALPK3Q96L96 1907 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 CACNA1EQ15878 2313 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 SPTA1P02549 2419 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 SRCAPQ6ZRS2 3230 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 TMEM8BA6NDV4 472 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 C1QTNF9P0C862 333 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 ZNF137PP52743 207 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 RPL8P62917 257 aaKnown RBP12.36□□□□□ -0.43
NUP50-201ENST00000347635 CCL8P80075 99 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 PSG7Q13046 419 aa12.36□□□□□ -0.43
NUP50-201ENST00000347635 KLF2Q9Y5W3 355 aaPredicted RBP12.35□□□□□ -0.43
NUP50-201ENST00000347635 IGKV3D-15A0A087WSY6 115 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 M0QZ24 198 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 CGAP01215 116 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 CELA3BP08861 270 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 HINT1P49773 126 aaPredicted RBP12.35□□□□□ -0.43
NUP50-201ENST00000347635 IL15RAQ13261 267 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 DNAJC4Q9NNZ3 241 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 FANCMQ8IYD8 2048 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 APOBEC3AP31941 199 aaPredicted RBP12.35□□□□□ -0.43
NUP50-201ENST00000347635 TBR1Q16650 682 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 ZNF714Q96N38 554 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 MRPL32Q9BYC8 188 aaKnown RBP12.35□□□□□ -0.43
NUP50-201ENST00000347635 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
NUP50-201ENST00000347635 RRHO14718 337 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 IGKV1-5P01602 117 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 ADMP35318 185 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 SELENOTP62341 195 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 OR51G1Q8NGK1 321 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 VKORC1Q9BQB6 163 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 AGMATQ9BSE5 352 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 LIME1Q9H400 295 aa12.35□□□□□ -0.43
NUP50-201ENST00000347635 A8MWL6 223 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 SNRPCP09234 159 aaKnown RBP12.34□□□□□ -0.43
NUP50-201ENST00000347635 VWA1Q6PCB0 445 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 TCF23Q7RTU1 214 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 RASL11BQ9BPW5 248 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 IL18BPO95998 194 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 WASHC3Q9Y3C0 194 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 ZNF738Q8NE65 137 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 HYPMO75409 117 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 FAM90A2PQ658T7 463 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 TRBV6-6A0A0A6YYG2 114 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 APELAP0DMC3 54 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 IGFBP2P18065 325 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 C21orf62-AS1Q17RA5 79 aa12.34□□□□□ -0.43
NUP50-201ENST00000347635 RPP25LQ8N5L8 163 aaKnown RBP12.34□□□□□ -0.43
NUP50-201ENST00000347635 RNASE6Q93091 150 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms