RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 RNF5Q99942 180 aa3.4□□□□□ -1.87
BPTF-204ENST00000342579 SLIRPQ9GZT3 109 aaKnown RBP3.4□□□□□ -1.87
BPTF-204ENST00000342579 NAA50Q9GZZ1 169 aaKnown RBP3.4□□□□□ -1.87
BPTF-204ENST00000342579 MEGF9Q9H1U4 602 aa3.4□□□□□ -1.87
BPTF-204ENST00000342579 SLA2Q9H6Q3 261 aa3.4□□□□□ -1.87
BPTF-204ENST00000342579 Q9N2K0 584 aa3.4□□□□□ -1.87
BPTF-204ENST00000342579 PEMTQ9UBM1 199 aa3.4□□□□□ -1.87
BPTF-204ENST00000342579 SMPXQ9UHP9 88 aa3.4□□□□□ -1.87
BPTF-204ENST00000342579 ANXA10Q9UJ72 324 aa3.4□□□□□ -1.87
BPTF-204ENST00000342579 SIGLEC9Q9Y336 463 aa3.4□□□□□ -1.87
BPTF-204ENST00000342579 NPIPB11E5RHQ5 1161 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 KRASP01116 189 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 IGLV3-1P01715 115 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 PPBPP02775 128 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 ELANEP08246 267 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 FCGR3AP08637 254 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 OR8U8P0C7N1 319 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 AKAIN1P0CW23 69 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 CCR6P51684 374 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 NCS1P62166 190 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 MRPL23Q16540 153 aaKnown RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 LAMTOR1Q6IAA8 161 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 UQCC3Q6UW78 93 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 SLC25A48Q6ZT89 311 aaKnown RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 C9orf139Q6ZV77 190 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 PRIMA1Q86XR5 153 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 LYSMD2Q8IV50 215 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 ARRDC1Q8N5I2 433 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 OR1S1Q8NH92 325 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 RTN4IP1Q8WWV3 396 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 RGP1Q92546 391 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 ARPC1AQ92747 370 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 PINX1Q96BK5 328 aaKnown RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 P2RX4Q99571 388 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 MDFIQ99750 246 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 HDHD3Q9BSH5 251 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 KCNK15Q9H427 330 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 GPN1Q9HCN4 374 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 FBLN5Q9UBX5 448 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 FBXL17Q9UF56 701 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 FOXA2Q9Y261 457 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 TMEM14DPA8MWL7 114 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 PIN1P1O15428 100 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 IGHV3-11P01762 117 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 IFNA4P05014 189 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 NPSP0C0P6 89 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 H2AFB1P0C5Y9 115 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 SMIM6P0DI80 62 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 IGFBP3P17936 291 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 PVALBP20472 110 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 AADACP22760 399 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 KRTAP21-3Q3LHN1 58 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 ZNF546Q86UE3 836 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 OR4P4Q8NGL7 312 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 OR1L6Q8NGR2 347 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 OSR1Q8TAX0 266 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 CASTOR1Q8WTX7 329 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 RNF166Q96A37 237 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 SAT2Q96F10 170 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 RNF2Q99496 336 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 ZNF430Q9H8G1 570 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 PLEKHA3Q9HB20 300 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 GOLT1BQ9Y3E0 138 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 WNK1Q9H4A3 2382 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 ATRQ13535 2644 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 FAM90A9PA6NNJ1 464 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 GABARAPH6UMI1 98 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 DNASE2O00115 360 aaPredicted RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 RRHO14718 337 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 XRCC3O43542 346 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 IFNA10P01566 189 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 APELAP0DMC3 54 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 AKR1C4P17516 323 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 SLC6A1P30531 599 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 LPAR6P43657 344 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 TAS2R20P59543 309 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 BLCAPP62952 87 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 CD69Q07108 199 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 RPL39P5Q59GN2 51 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 PLET1Q6UQ28 207 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 ZNF66Q6ZN08 573 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 NDUFA11Q86Y39 141 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 LFNGQ8NES3 379 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 MRPL30Q8TCC3 161 aaKnown RBP3.39□□□□□ -1.87
BPTF-204ENST00000342579 MRAPQ8TCY5 172 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 GRAMD2BQ96HH9 432 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 TM2D1Q9BX74 207 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 OR51J1Q9H342 316 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 RELNP78509 3460 aa3.39□□□□□ -1.87
BPTF-204ENST00000342579 SAA2-SAA4A0A096LPE2 208 aa3.38□□□□□ -1.87
BPTF-204ENST00000342579 RPS10-NUDT3A0A1W2PQS6 291 aa3.38□□□□□ -1.87
BPTF-204ENST00000342579 SEC14L6B5MCN3 397 aa3.38□□□□□ -1.87
BPTF-204ENST00000342579 J3QRE1 110 aa3.38□□□□□ -1.87
BPTF-204ENST00000342579 SULT1C2O00338 296 aa3.38□□□□□ -1.87
BPTF-204ENST00000342579 SAA2P0DJI9 122 aaPredicted RBP3.38□□□□□ -1.87
BPTF-204ENST00000342579 MMP9P14780 707 aa3.38□□□□□ -1.87
BPTF-204ENST00000342579 HIST1H1BP16401 226 aaKnown RBP3.38□□□□□ -1.87
BPTF-204ENST00000342579 NPBWR1P48145 328 aa3.38□□□□□ -1.87
BPTF-204ENST00000342579 SRPXP78539 464 aa3.38□□□□□ -1.87
BPTF-204ENST00000342579 PRR31Q5SQ13 230 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms