RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 RHOGP84095 191 aa11.71□□□□□ -0.53
PRKN-201ENST00000338468 RNASE10Q5GAN6 216 aaKnown RBP11.71□□□□□ -0.53
PRKN-201ENST00000338468 TMEM229BQ8NBD8 167 aa11.71□□□□□ -0.53
PRKN-201ENST00000338468 C15orf40Q8WUR7 153 aa11.71□□□□□ -0.53
PRKN-201ENST00000338468 USMG5Q96IX5 58 aa11.71□□□□□ -0.53
PRKN-201ENST00000338468 WWC2-AS2Q96NR7 200 aa11.71□□□□□ -0.53
PRKN-201ENST00000338468 FYTTD1Q96QD9 318 aaKnown RBP11.71□□□□□ -0.53
PRKN-201ENST00000338468 RBM38Q9H0Z9 239 aaKnown RBP11.71□□□□□ -0.53
PRKN-201ENST00000338468 HRASLSQ9HDD0 168 aa11.71□□□□□ -0.53
PRKN-201ENST00000338468 MARCH11A6NNE9 402 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 CRYGCP07315 174 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 TBPP20226 339 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 KLK9Q2XQG4 91 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 LPCAT3Q6P1A2 487 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 ACSM6Q6P461 480 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 TBC1D26Q86UD7 250 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 SLC38A6Q8IZM9 456 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 ARRDC1Q8N5I2 433 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 DMBX1Q8NFW5 382 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 SMIM4Q8WVI0 70 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 MRGPRFQ96AM1 343 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 DIRAS2Q96HU8 199 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 FANCD2OSQ96PS1 177 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 SOSTQ9BQB4 213 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 RANGRFQ9HD47 186 aaPredicted RBP11.7□□□□□ -0.54
PRKN-201ENST00000338468 KLK9Q9UKQ9 250 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 ZNF257Q9Y2Q1 563 aa11.7□□□□□ -0.54
PRKN-201ENST00000338468 IGLC7A0M8Q6 106 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 FAM223BA6NKX1 122 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 CTDSPLO15194 276 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 NOL3O60936 208 aaKnown RBP11.69□□□□□ -0.54
PRKN-201ENST00000338468 KRASP01116 189 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 IGKV1-39P01597 117 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 IGKV1D-39P04432 117 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 FGF2P09038 288 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 CTRB1P17538 263 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 PI3P19957 117 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 PSMB6P28072 239 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 G6PCP35575 357 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 INSL3P51460 131 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 MRPS10P82664 201 aaKnown RBP11.69□□□□□ -0.54
PRKN-201ENST00000338468 KLF5Q13887 457 aaPredicted RBP11.69□□□□□ -0.54
PRKN-201ENST00000338468 CTRB2Q6GPI1 263 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 SLC25A42Q86VD7 318 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 FAM223AQ8IWN6 122 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 CADM3Q8N126 398 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 NECAP1Q8NC96 275 aa11.69□□□□□ -0.54
PRKN-201ENST00000338468 C6orf62Q9GZU0 229 aaPredicted RBP11.69□□□□□ -0.54
PRKN-201ENST00000338468 PEF1Q9UBV8 284 aaKnown RBP11.69□□□□□ -0.54
PRKN-201ENST00000338468 OR2J3O76001 311 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 IFNA6P05013 189 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 REG1AP05451 166 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 PTBP1P26599 531 aaKnown RBP eCLIP11.68□□□□□ -0.54
PRKN-201ENST00000338468 TNFSF8P32971 234 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 ECI1P42126 302 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 TAS2R19P59542 299 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 RND3P61587 244 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 SSBP1Q04837 148 aaKnown RBP11.68□□□□□ -0.54
PRKN-201ENST00000338468 EXOSC2Q13868 293 aaKnown RBP11.68□□□□□ -0.54
PRKN-201ENST00000338468 IL18Q14116 193 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 DEFB121Q5J5C9 76 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 FAAP20Q6NZ36 180 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 STEAP1BQ6NZ63 245 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 ZNF429Q86V71 674 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 PRR25Q96S07 402 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 FAM212BQ9NTI7 297 aaPredicted RBP11.68□□□□□ -0.54
PRKN-201ENST00000338468 DMRT1Q9Y5R6 373 aa11.68□□□□□ -0.54
PRKN-201ENST00000338468 TEX50A0A1B0GTY4 177 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 DBX1A6NMT0 343 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 BMPR1BO00238 502 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 SAP30O75446 220 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 NDUFB8O95169 186 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 RAB3DO95716 219 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 ZP3P21754 424 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 ERVK-16P61578 105 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 ATP5G2Q06055 141 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 CD69Q07108 199 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 C15orf32Q32M92 178 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 IL34Q6ZMJ4 242 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 OR10W1Q8NGF6 305 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 TERB2Q8NHR7 220 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 MCFD2Q8NI22 146 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 SEC22AQ96IW7 307 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 COMMD5Q9GZQ3 224 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 ZMAT5Q9UDW3 170 aaKnown RBP11.67□□□□□ -0.54
PRKN-201ENST00000338468 FBXL7Q9UJT9 491 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 NSG2Q9Y328 171 aa11.67□□□□□ -0.54
PRKN-201ENST00000338468 IGLV11-55A0A075B6I3 123 aa11.66□□□□□ -0.54
PRKN-201ENST00000338468 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.66□□□□□ -0.54
PRKN-201ENST00000338468 DPPA5A6NC42 116 aa11.66□□□□□ -0.54
PRKN-201ENST00000338468 GSTZ1O43708 216 aaPredicted RBP11.66□□□□□ -0.54
PRKN-201ENST00000338468 PGAM2P15259 253 aa11.66□□□□□ -0.54
PRKN-201ENST00000338468 PPP5CP53041 499 aa11.66□□□□□ -0.54
PRKN-201ENST00000338468 OR13C8Q8NGS7 320 aa11.66□□□□□ -0.54
PRKN-201ENST00000338468 ZNF486Q96H40 463 aaPredicted RBP11.66□□□□□ -0.54
PRKN-201ENST00000338468 SRSF8Q9BRL6 282 aaKnown RBP11.66□□□□□ -0.54
PRKN-201ENST00000338468 QTRT1Q9BXR0 403 aaKnown RBP11.66□□□□□ -0.54
PRKN-201ENST00000338468 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
PRKN-201ENST00000338468 RABL2AQ9UBK7 228 aaPredicted RBP11.66□□□□□ -0.54
PRKN-201ENST00000338468 RABL2BQ9UNT1 228 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms