RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 PLXNB2O15031 1838 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 LOXL3P58215 753 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 ATP5G2Q06055 141 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 OR5P3Q8WZ94 311 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 FNDC4Q9H6D8 234 aaPredicted RBP4.72□□□□□ -1.65
PTPRB-202ENST00000334414 TCF19Q9Y242 345 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 CHTOPQ9Y3Y2 248 aaKnown RBP4.72□□□□□ -1.65
PTPRB-202ENST00000334414 TRBV6-7A0A0A0MS04 114 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 METTL12A8MUP2 240 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 C3orf80F5H4A9 247 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 MPV17P39210 176 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 CFAP161Q6P656 301 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 C20orf144Q9BQM9 153 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 AURKAIP1Q9NWT8 199 aaPredicted RBP4.72□□□□□ -1.65
PTPRB-202ENST00000334414 IL6RP08887 468 aaPredicted RBP4.72□□□□□ -1.65
PTPRB-202ENST00000334414 DEFB103AP81534 67 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 RFESDQ8TAC1 157 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 C8orf44Q96CB5 159 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 C18orf12Q96KH6 178 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 GP6Q9HCN6 339 aa4.72□□□□□ -1.65
PTPRB-202ENST00000334414 NHP2Q9NX24 153 aaKnown RBP4.72□□□□□ -1.65
PTPRB-202ENST00000334414 ZG16O60844 167 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 CTGFP29279 349 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 LHX2P50458 406 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 ZNF721Q8TF20 911 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 DDB2Q92466 427 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 IDI2-AS1Q9NZ38 188 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 A0A0G2JMZ2 1700 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 LRRC37A2A6NM11 1700 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 LRRC37AA6NMS7 1700 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 NPIPB11E5RHQ5 1161 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 H0Y8X5 98 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 C1QL1O75973 258 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 COX7A1P24310 79 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 GFERP55789 205 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 OCIAD2Q56VL3 154 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 UTF1Q5T230 341 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 CCL17Q92583 94 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 ATP6V0BQ99437 205 aa4.71□□□□□ -1.65
PTPRB-202ENST00000334414 TSPAN7P41732 249 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 RPL23P62829 140 aaKnown RBP4.71□□□□□ -1.66
PTPRB-202ENST00000334414 MBNL2Q5VZF2 373 aaKnown RBP4.71□□□□□ -1.66
PTPRB-202ENST00000334414 ZNF831Q5JPB2 1677 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 GAGE12BA1L429 117 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 RAMP1O60894 148 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 RND2P52198 227 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 FOXD3Q9UJU5 478 aaPredicted RBP4.71□□□□□ -1.66
PTPRB-202ENST00000334414 COL5A3P25940 1745 aaPredicted RBP4.71□□□□□ -1.66
PTPRB-202ENST00000334414 COLCA2A8K830 154 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 CEACAM4O75871 244 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 TNFRSF6BO95407 300 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 CRPP02741 224 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 EAF1Q96JC9 268 aaPredicted RBP4.71□□□□□ -1.66
PTPRB-202ENST00000334414 RASL10BQ96S79 203 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 KIAA1217Q5T5P2 1943 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 IFITM1P13164 125 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 LOXL4Q96JB6 756 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 DMRTA2Q96SC8 542 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 CALYQ9NYX4 217 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 IGLV1-36A0A0B4J1U3 117 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 SHANK3Q9BYB0 1731 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 ACYP1P07311 99 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 SPINK8P0C7L1 97 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 PLEKHB2Q96CS7 222 aa4.71□□□□□ -1.66
PTPRB-202ENST00000334414 PHF7Q9BWX1 381 aaPredicted RBP4.71□□□□□ -1.66
PTPRB-202ENST00000334414 PSME4Q14997 1843 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 FAM90A2PQ658T7 463 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 NAPSAO96009 420 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 NPPCP23582 126 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 MAJINQ3KP22 176 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 SLC25A47Q6Q0C1 308 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 TMSB15BA0A087X1C1 80 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 TRAV2A0A0B4J234 112 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 H3BMM0 161 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 ZNF688P0C7X2 276 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 HOXB3P14651 431 aaPredicted RBP4.7□□□□□ -1.66
PTPRB-202ENST00000334414 TMEM54Q969K7 222 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 NEUROG3Q9Y4Z2 214 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 NDUFC2O95298 119 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 PCSK4Q6UW60 755 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 THY1P04216 161 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 TIMP3P35625 211 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 OR11H6Q8NGC7 330 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 CLEC7AQ9BXN2 247 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 ERG28Q9UKR5 140 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 EVPLQ92817 2033 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 RNASE1P07998 156 aaKnown RBP4.7□□□□□ -1.66
PTPRB-202ENST00000334414 RTP5Q14D33 572 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 TEX38Q6PEX7 206 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 VWC2LB2RUY7 222 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 ECSCRQ19T08 205 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 PRSS53Q2L4Q9 553 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 C9orf153Q5TBE3 101 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 RPRMQ9NS64 109 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 AMBPP02760 352 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 CXorf66Q5JRM2 361 aaPredicted RBP4.7□□□□□ -1.66
PTPRB-202ENST00000334414 ASPHD2Q6ICH7 369 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 IGHV1OR21-1A0A087WYE8 117 aa4.7□□□□□ -1.66
PTPRB-202ENST00000334414 ZNF815PA8K554 130 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms