RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 COMMD5Q9GZQ3 224 aa11.32□□□□□ -0.6
TUBA3D-201ENST00000321253 RSL24D1Q9UHA3 163 aaKnown RBP11.32□□□□□ -0.6
TUBA3D-201ENST00000321253 ZNF257Q9Y2Q1 563 aa11.32□□□□□ -0.6
TUBA3D-201ENST00000321253 ANKRD34BA5PLL1 514 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 FAM223BA6NKX1 122 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 DHFRP00374 187 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 KRASP01116 189 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 PRH1P02810 166 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 ZNF735P0CB33 412 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 PPP5CP53041 499 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 KRTAP10-11P60412 298 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 RHOGP84095 191 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 MEF2DQ14814 521 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 LHFPL1Q86WI0 220 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 FAM223AQ8IWN6 122 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 OR4D10Q8NGI6 311 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 ZNF486Q96H40 463 aaPredicted RBP11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 NXF2Q9GZY0 626 aaKnown RBP11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 SLC2A9Q9NRM0 540 aa11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 FAM212BQ9NTI7 297 aaPredicted RBP11.31□□□□□ -0.6
TUBA3D-201ENST00000321253 TRAV3A0A0B4J244 114 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 FABP12A6NFH5 140 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 NPIPB5A8MRT5 1133 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 E7EUB6 86 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 FGF2P09038 288 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 MYOD1P15172 320 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 ZP3P21754 424 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 TNFSF8P32971 234 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 ZNF585BQ52M93 769 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 NECAP1Q8NC96 275 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 TERB2Q8NHR7 220 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 DLX4Q92988 240 aaPredicted RBP11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 AKIP1Q9NQ31 210 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 DISC1C4P0D8 188 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 ZNF701M0R085 212 aaPredicted RBP11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 SNAPC5O75971 98 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 AREGP15514 252 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 PI3P19957 117 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 G6PCP35575 357 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 INSL3P51460 131 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 PIGPP57054 158 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 OR2B8PP59922 312 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 ZNF45Q02386 682 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 ATP5G2Q06055 141 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 ZNF343Q6P1L6 599 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 ZFAND1Q8TCF1 268 aa11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 RBM38Q9H0Z9 239 aaKnown RBP11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 PEF1Q9UBV8 284 aaKnown RBP11.3□□□□□ -0.6
TUBA3D-201ENST00000321253 PRKDCP78527 4128 aaKnown RBP11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 TRBV9A0A0B4J1U6 114 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 A0A1B0GW64 132 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 GSTZ1O43708 216 aaPredicted RBP11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 SAP30O75446 220 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 SERPINE2P07093 398 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 AKAIN1P0CW23 69 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 DEFA4P12838 97 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 PSMB6P28072 239 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 S100A5P33763 92 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 ECI1P42126 302 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 RND3P61587 244 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 EXOSC2Q13868 293 aaKnown RBP11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 ZNF429Q86V71 674 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 CCDC71LQ8N9Z2 235 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 SRSF8Q9BRL6 282 aaKnown RBP11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 QTRT1Q9BXR0 403 aaKnown RBP11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 COPZ2Q9P299 210 aa11.29□□□□□ -0.6
TUBA3D-201ENST00000321253 RBMXL2O75526 392 aaKnown RBP11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 OR2J3O76001 311 aa11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 REG1AP05451 166 aa11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 CRYGCP07315 174 aa11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 C15orf32Q32M92 178 aa11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 THOC7Q6I9Y2 204 aaKnown RBP11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 FAAP20Q6NZ36 180 aa11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 CADM3Q8N126 398 aa11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 OR1L8Q8NGR8 309 aa11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 OR13C8Q8NGS7 320 aa11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 TSC22D3Q99576 134 aa11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 FBXL7Q9UJT9 491 aa11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 PRNDQ9UKY0 176 aa11.28□□□□□ -0.6
TUBA3D-201ENST00000321253 WI2-2373I1.2A0A1W2PRP0 233 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 CGB1A6NKQ9 187 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 H0Y980 276 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 K7EIL1 84 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 TRAPPC2P0DI81 140 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 TRAPPC2BP0DI82 140 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 HIST1H1BP16401 226 aaKnown RBP11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 CTRB1P17538 263 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 PTBP1P26599 531 aaKnown RBP eCLIP11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 FAM209BQ5JX69 171 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 CTRB2Q6GPI1 263 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 C19orf35Q6ZS72 473 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 H2BFWTQ7Z2G1 175 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 HSD17B13Q7Z5P4 300 aaPredicted RBP11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 OR4C16Q8NGL9 310 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 MARCH1Q8TCQ1 289 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 ELOVL1Q9BW60 279 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 HINT2Q9BX68 163 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 FKBP11Q9NYL4 201 aa11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 C14orf166Q9Y224 244 aaKnown RBP11.27□□□□□ -0.61
TUBA3D-201ENST00000321253 NSG2Q9Y328 171 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms