RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 C18orf15Q96N68 181 aa14.47□□□□□ -0.09
SMCHD1-201ENST00000320876 TTTY12Q9BZ98 90 aa14.47□□□□□ -0.09
SMCHD1-201ENST00000320876 PLA2G2FQ9BZM2 168 aa14.47□□□□□ -0.09
SMCHD1-201ENST00000320876 IGHV3OR16-12A0A075B7B8 117 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 OR2K2Q8NGT1 345 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 CEACAM4O75871 244 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 ZAR1Q86SH2 424 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 PGPEP1LA6NFU8 196 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 ZG16O60844 167 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 FOXC2Q99958 501 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 ZNF818PQ6ZRF7 136 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 FTH1P19P0C7X4 201 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 TMEM187Q14656 261 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 OR11H4Q8NGC9 324 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 Q96M66 194 aa14.46□□□□□ -0.09
SMCHD1-201ENST00000320876 IFITM2Q01629 132 aa14.46□□□□□ -0.1
SMCHD1-201ENST00000320876 SCGB3A1Q96QR1 104 aa14.46□□□□□ -0.1
SMCHD1-201ENST00000320876 UCP3P55916 312 aa14.46□□□□□ -0.1
SMCHD1-201ENST00000320876 Q5PR19 223 aa14.46□□□□□ -0.1
SMCHD1-201ENST00000320876 ZNF324BQ6AW86 544 aaPredicted RBP14.46□□□□□ -0.1
SMCHD1-201ENST00000320876 MAFAQ8NHW3 353 aaPredicted RBP14.46□□□□□ -0.1
SMCHD1-201ENST00000320876 CALYQ9NYX4 217 aa14.46□□□□□ -0.1
SMCHD1-201ENST00000320876 TRBV5-7A0A0A0MS05 114 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 CCL8P80075 99 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 FUT5Q11128 374 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 EEF1AKMT3Q96AZ1 226 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 CLEC2AQ6UVW9 174 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 TMEM92Q6UXU6 159 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 MBD1Q9UIS9 605 aaPredicted RBP14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 APOHP02749 345 aaPredicted RBP14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 LINC00469Q8N7U9 141 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 NABP2Q9BQ15 211 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 CACNA1BQ00975 2339 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 C5orf30Q96GV9 206 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 IDI2-AS1Q9NZ38 188 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 PF4V1P10720 104 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 SRSF5Q13243 272 aaKnown RBP14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 ZNF385AQ96PM9 386 aaKnown RBP14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 UPK3AO75631 287 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 REG1AP05451 166 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 A8MXK9 166 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 SYNGR3O43761 229 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 VKORC1L1Q8N0U8 176 aa14.45□□□□□ -0.1
SMCHD1-201ENST00000320876 CNTFRP26992 372 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 ORMDL3Q8N138 153 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 RCC1LQ96I51 464 aaKnown RBP14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 TNFRSF18Q9Y5U5 241 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 PEX7O00628 323 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 SLC25A38Q96DW6 304 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 SLC25A20O43772 301 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 UNQ5815/PRO19632Q6UWF5 114 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 PSMB11A5LHX3 300 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 APOMO95445 188 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 IGKV1D-16P01601 117 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 TPRX1Q8N7U7 411 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 SIGMAR1Q99720 223 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 SHANK3Q9BYB0 1731 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 TRBV7-9A0A0J9YWB2 115 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 FOXI3A8MTJ6 420 aaPredicted RBP14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 TMEM229AB2RXF0 380 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 OR5AN1Q8NGI8 311 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 SSBP3Q9BWW4 388 aaPredicted RBP14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 SCN10AQ9Y5Y9 1956 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 DEFB124Q8NES8 71 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 DUX5Q96PT3 197 aa14.44□□□□□ -0.1
SMCHD1-201ENST00000320876 TMEM171Q8WVE6 324 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 GATAD1Q8WUU5 269 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 R4GN57 208 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 IGKV3OR2-268A0A0C4DH90 116 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 DCAF10Q5QP82 559 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 KCNK17Q96T54 332 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 SPEM2Q0P670 501 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 JPT1Q9UK76 154 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 NPPCP23582 126 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 PMS2CLQ68D20 193 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 RPP21Q9H633 154 aaKnown RBP14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 ZNF729A6NN14 1252 aaPredicted RBP14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 NDUFA3O95167 84 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 DTX4Q9Y2E6 619 aa14.43□□□□□ -0.1
SMCHD1-201ENST00000320876 IGHMP01871 453 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 WDR82Q6UXN9 313 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 TCF19Q9Y242 345 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 THY1P04216 161 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 C1orf185Q5T7R7 199 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 OR4X2Q8NGF9 303 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 DPH3Q96FX2 82 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 SNAI3Q3KNW1 292 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 GPR183P32249 361 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 NUTF2P61970 127 aaKnown RBP14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 LHFPL6Q9Y693 200 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 ACACAQ13085 2346 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 CKS1BP61024 79 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 NCOR1O75376 2440 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 HOXB1P14653 301 aaPredicted RBP14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 ASIPP42127 132 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 DLL3Q9NYJ7 618 aa14.42□□□□□ -0.1
SMCHD1-201ENST00000320876 ACSF3Q4G176 576 aaPredicted RBP14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 ST6GALNAC3Q8NDV1 305 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 TMEM186Q96B77 213 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms