RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 RAB7AP51149 207 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 MRPS11P82912 194 aaKnown RBP7.98□□□□□ -1.13
RPGR-201ENST00000318842 MSMO1Q15800 293 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 ACOT6Q3I5F7 207 aaPredicted RBP7.98□□□□□ -1.13
RPGR-201ENST00000318842 MORN5Q5VZ52 161 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 PRR27Q6MZM9 219 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 TREML4Q6UXN2 200 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 PQLC2Q6ZP29 291 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 TGIF2LYQ8IUE0 185 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 SLC25A40Q8TBP6 338 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 SNRNP40Q96DI7 357 aaKnown RBP7.98□□□□□ -1.13
RPGR-201ENST00000318842 YPEL2Q96QA6 119 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 GJE1A6NN92 205 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 CIDEAO60543 219 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 NDUFB8O95169 186 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 CHRNB4P30926 498 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 CLDN18P56856 261 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 PLGLB1Q02325 96 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 PLP2Q04941 152 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 FOXF2Q12947 444 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 ZNF573Q86YE8 665 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 OR10G8Q8NGN5 311 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 LSM10Q969L4 123 aaKnown RBP7.98□□□□□ -1.13
RPGR-201ENST00000318842 CIB3Q96Q77 187 aaPredicted RBP7.98□□□□□ -1.13
RPGR-201ENST00000318842 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.98□□□□□ -1.13
RPGR-201ENST00000318842 KMT2EQ8IZD2 1858 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 LOC102723996A0A087X1L8 192 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 TRAV5A0A0B4J249 113 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 DIRC3C9JPN6 131 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 K7ESF4 209 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 TOX4O94842 621 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 CTXN2P0C2S0 81 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 ZNF134P52741 427 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 SPATA45Q537H7 98 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 PDLIM3Q53GG5 364 aaPredicted RBP7.98□□□□□ -1.13
RPGR-201ENST00000318842 PRAMEF5Q5TYX0 476 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 ZNRF1Q8ND25 227 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 GALMQ96C23 342 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 PMCHL2Q9BQD1 86 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 RPH3ALQ9UNE2 315 aa7.98□□□□□ -1.13
RPGR-201ENST00000318842 M0R1X1 148 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 IGFBP2P18065 325 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 SRIP30626 198 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 CXCL12P48061 93 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 RNFT1Q5M7Z0 435 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 DCAF10Q5QP82 559 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 Q6ZN92 141 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 OR5AU1Q8NGC0 362 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 CT55Q8WUE5 264 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 TRIB1Q96RU8 372 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 INTS1Q8N201 2190 aaKnown RBP7.97□□□□□ -1.13
RPGR-201ENST00000318842 AKAP13Q12802 2813 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 CCL25O15444 150 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 CEACAM8P31997 349 aaPredicted RBP7.97□□□□□ -1.13
RPGR-201ENST00000318842 SPATA12Q7Z6I5 190 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 CENPVQ7Z7K6 275 aaPredicted RBP7.97□□□□□ -1.13
RPGR-201ENST00000318842 MMD2Q8IY49 270 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 Q8NFD4 153 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 SNIP1Q8TAD8 396 aaKnown RBP7.97□□□□□ -1.13
RPGR-201ENST00000318842 ANAPC16Q96DE5 110 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 TXN2Q99757 166 aa7.97□□□□□ -1.13
RPGR-201ENST00000318842 MRPS18CQ9Y3D5 142 aaKnown RBP7.97□□□□□ -1.13
RPGR-201ENST00000318842 FOXE3Q13461 319 aa7.96□□□□□ -1.13
RPGR-201ENST00000318842 VHLLQ6RSH7 139 aa7.96□□□□□ -1.13
RPGR-201ENST00000318842 Q6ZS49 121 aa7.96□□□□□ -1.13
RPGR-201ENST00000318842 C19orf35Q6ZS72 473 aa7.96□□□□□ -1.13
RPGR-201ENST00000318842 TMEM251Q8N6I4 163 aa7.96□□□□□ -1.13
RPGR-201ENST00000318842 NINJ1Q92982 152 aa7.96□□□□□ -1.13
RPGR-201ENST00000318842 MIEN1Q9BRT3 115 aa7.96□□□□□ -1.13
RPGR-201ENST00000318842 TTTY12Q9BZ98 90 aa7.96□□□□□ -1.13
RPGR-201ENST00000318842 TTC28Q96AY4 2481 aa7.96□□□□□ -1.13
RPGR-201ENST00000318842 A6NJY4 79 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 J3QT63 122 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 SNAI2O43623 268 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 CCKARP32238 428 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 SRP14P37108 136 aaKnown RBP7.96□□□□□ -1.14
RPGR-201ENST00000318842 ZNF83P51522 516 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 Q56UQ5 140 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 CENPWQ5EE01 88 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 ZNF645Q8N7E2 425 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 STPG3Q8N7X2 389 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 Q8N976 141 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 DEFB108BQ8NET1 73 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 HSD17B10Q99714 261 aaKnown RBP7.96□□□□□ -1.14
RPGR-201ENST00000318842 GGTLC1Q9BX51 225 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 NRN1Q9NPD7 142 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 CLEC5AQ9NY25 188 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 GNG12Q9UBI6 72 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 IL6RP08887 468 aaPredicted RBP7.96□□□□□ -1.14
RPGR-201ENST00000318842 SSBP2P81877 361 aaPredicted RBP7.96□□□□□ -1.14
RPGR-201ENST00000318842 PSG5Q15238 335 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 RIPPLY2Q5TAB7 128 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 LINC00173Q6ZV60 143 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 CNEP1R1Q8N9A8 125 aa7.96□□□□□ -1.14
RPGR-201ENST00000318842 IGHV3-21A0A0B4J1V1 117 aa7.95□□□□□ -1.14
RPGR-201ENST00000318842 HSBP1L1C9JCN9 74 aa7.95□□□□□ -1.14
RPGR-201ENST00000318842 ITGB1BP1O14713 200 aa7.95□□□□□ -1.14
RPGR-201ENST00000318842 CER1O95813 267 aa7.95□□□□□ -1.14
RPGR-201ENST00000318842 CAMPP49913 170 aa7.95□□□□□ -1.14
RPGR-201ENST00000318842 TPPP2P59282 170 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms