RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 NUP37Q8NFH4 326 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 COQ2Q96H96 371 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 GPHA2Q96T91 129 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 MBNL3Q9NUK0 354 aaKnown RBP10.84□□□□□ -0.67
CPNE1-201ENST00000317677 LAMTOR2Q9Y2Q5 125 aa10.84□□□□□ -0.67
CPNE1-201ENST00000317677 KIAA2026Q5HYC2 2103 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 HERV-K104P61576 105 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 RPL23P62829 140 aaKnown RBP10.83□□□□□ -0.68
CPNE1-201ENST00000317677 BSPH1Q075Z2 132 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 ADIRFQ15847 76 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 KCNIP4Q6PIL6 250 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 GCSAMQ8N6F7 178 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 PRR7Q8TB68 274 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 ITLN1Q8WWA0 313 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 RTN4IP1Q8WWV3 396 aaPredicted RBP10.83□□□□□ -0.68
CPNE1-201ENST00000317677 NUDT11Q96G61 164 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 OR1A1Q9P1Q5 309 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 CACNA1DQ01668 2161 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 SPTBN1Q01082 2364 aaKnown RBP10.83□□□□□ -0.68
CPNE1-201ENST00000317677 SRRM5B3KS81 715 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 TMEM250H0YL14 139 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 NUPR1O60356 82 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 GNLYP22749 145 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 RNF151Q2KHN1 245 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 ZNF818PQ6ZRF7 136 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 MOGAT3Q86VF5 341 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 ST6GALNAC3Q8NDV1 305 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 OR5C1Q8NGR4 320 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 CMTM2Q8TAZ6 248 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 SMIM7Q9BQ49 75 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 PAM16Q9Y3D7 125 aa10.83□□□□□ -0.68
CPNE1-201ENST00000317677 RAI1Q7Z5J4 1906 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-201ENST00000317677 ADGRG4Q8IZF6 3080 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 USP9XQ93008 2570 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-201ENST00000317677 CBY3A6NI87 242 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 IGHV1-46P01743 117 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 ASCL1P50553 236 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 RPL19P84098 196 aaKnown RBP10.82□□□□□ -0.68
CPNE1-201ENST00000317677 CDSNQ15517 529 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 ABCA11PQ4W5N1 156 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 FBLN7Q53RD9 439 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 ZNF787Q6DD87 383 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 TMEM108Q6UXF1 575 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 IL22RA2Q969J5 263 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 ATP5SQ99766 215 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 VPS25Q9BRG1 176 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 MRPS16Q9Y3D3 137 aaKnown RBP10.82□□□□□ -0.68
CPNE1-201ENST00000317677 SPTAN1Q13813 2472 aaKnown RBP10.82□□□□□ -0.68
CPNE1-201ENST00000317677 RELNP78509 3460 aa10.82□□□□□ -0.68
CPNE1-201ENST00000317677 HIVEP3Q5T1R4 2406 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 IGKV1D-17A0A075B6S4 117 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 IGHV3OR15-7A0A075B7D8 119 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 ZFP92A6NM28 416 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 NPIPB11E5RHQ5 1161 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 IFNL4K9M1U5 179 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 VENTXO95231 258 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 CTXN2P0C2S0 81 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 PSG2P11465 335 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 CD99P14209 185 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 UCP1P25874 307 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 CFHR2P36980 270 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 ARF6P62330 175 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 SRPXP78539 464 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 RHOGP84095 191 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 AESQ08117 197 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 ADIPOQQ15848 244 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 FAM201AQ5SY85 155 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 FAM53AQ6NSI3 398 aaPredicted RBP10.81□□□□□ -0.68
CPNE1-201ENST00000317677 OR4C5Q8NGB2 326 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 RNF2Q99496 336 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 CCL28Q9NRJ3 127 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 CDC42EP3Q9UKI2 254 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 TRAPPC2LQ9UL33 140 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 DSCAMO60469 2012 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 ZNF737O75373 536 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 LHBP01229 141 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 NBEAP1P0C6P0 100 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 GRNP28799 593 aaKnown RBP10.81□□□□□ -0.68
CPNE1-201ENST00000317677 NKX2-1P43699 371 aaPredicted RBP10.81□□□□□ -0.68
CPNE1-201ENST00000317677 UQCRFS1P47985 274 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 COMPP49747 757 aaPredicted RBP10.81□□□□□ -0.68
CPNE1-201ENST00000317677 DYNLT3P51808 116 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 YPEL3P61236 119 aaPredicted RBP10.81□□□□□ -0.68
CPNE1-201ENST00000317677 ADORA2A-AS1P86434 159 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 TESK1Q15569 626 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 SMIM21Q3B7S5 101 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 MOB1BQ7L9L4 216 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 TMEM144Q7Z5S9 345 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 ODF3L1Q8IXM7 274 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 NECAP1Q8NC96 275 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 IL1F10Q8WWZ1 152 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 SMIM12Q96EX1 92 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 ZNF665Q9H7R5 613 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 MANBALQ9NQG1 85 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 RPH3ALQ9UNE2 315 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 TRAPPC1Q9Y5R8 145 aa10.81□□□□□ -0.68
CPNE1-201ENST00000317677 DUXBA0A1W2PPF3 345 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 MPPED1O15442 326 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 IGLV2-14P01704 120 aa10.8□□□□□ -0.68
CPNE1-201ENST00000317677 GATA4P43694 442 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms