RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 MST1P26927 711 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 MYOZ3Q8TDC0 251 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 DMRTA2Q96SC8 542 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 OR5AC2Q9NZP5 309 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 RPL13AP40429 203 aaKnown RBP11.36□□□□□ -0.59
RFFL-201ENST00000315249 BMPERQ8N8U9 685 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 LINC00527Q9UJ94 153 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 HSPB1P04792 205 aaKnown RBP11.36□□□□□ -0.59
RFFL-201ENST00000315249 WDR82Q6UXN9 313 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 OR51G1Q8NGK1 321 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 DCAF16Q9NXF7 216 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 CSRP3P50461 194 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 PSG9Q00887 426 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 WDR73Q6P4I2 378 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 TMEM219Q86XT9 240 aa11.36□□□□□ -0.59
RFFL-201ENST00000315249 A0A0B4J293 547 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 PGA5P0DJD9 388 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 MDS2Q8NDY4 140 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 WBP1Q96G27 269 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 M0R2Z0 102 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 ZNF79Q15937 498 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 PEMTQ9UBM1 199 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 MEOX2P50222 304 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 C19orf54Q5BKX5 351 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 C3orf56Q8N813 242 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 PHYHIPLQ96FC7 376 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 ALX3O95076 343 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 TMEM252Q8N6L7 170 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 TTC28Q96AY4 2481 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 PLA2G10O15496 165 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 AREGP15514 252 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 NBL1P41271 181 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 RGP1Q92546 391 aaPredicted RBP11.35□□□□□ -0.59
RFFL-201ENST00000315249 SHANK1Q9Y566 2161 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 IGLV3-32A0A0A0MS00 114 aa11.35□□□□□ -0.59
RFFL-201ENST00000315249 F12P00748 615 aaPredicted RBP11.35□□□□□ -0.59
RFFL-201ENST00000315249 MPDU1O75352 247 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 BTF3P20290 206 aaKnown RBP11.34□□□□□ -0.59
RFFL-201ENST00000315249 FAM159AQ6UWV7 190 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 GPR132Q9UNW8 380 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 FAM208BQ5VWN6 2430 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 CREBBPQ92793 2442 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 C9JCJ5 164 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 CFDP00746 253 aaPredicted RBP11.34□□□□□ -0.59
RFFL-201ENST00000315249 P2RY4P51582 365 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 OR4A47Q6IF82 309 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 TMEM133Q9H2Q1 129 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 FOXI3A8MTJ6 420 aaPredicted RBP11.34□□□□□ -0.59
RFFL-201ENST00000315249 SIAH2O43255 324 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 SMAGPQ0VAQ4 97 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 MRPL30Q8TCC3 161 aaKnown RBP11.34□□□□□ -0.59
RFFL-201ENST00000315249 RNF223E7ERA6 249 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 SRD5A1P18405 259 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 BRD3OSQ6XYD6 125 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 HSD17B13Q7Z5P4 300 aaPredicted RBP11.34□□□□□ -0.59
RFFL-201ENST00000315249 OR8A1Q8NGG7 326 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 ANAPC16Q96DE5 110 aa11.34□□□□□ -0.59
RFFL-201ENST00000315249 GTSCR1Q86UQ5 136 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 SLC25A38Q96DW6 304 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 TMEM14DPA8MWL7 114 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 NPIPB6E9PJ23 425 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 ISLRO14498 428 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 LINC00305Q7Z4B0 112 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 ZNF525Q8N782 197 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 PACRGQ96M98 296 aaPredicted RBP11.33□□□□□ -0.6
RFFL-201ENST00000315249 OR51M1Q9H341 326 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 PQLC2LA1A4F0 135 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 B4DSR2 109 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 RELBQ01201 579 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 KLRD1Q13241 179 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 C21orf62Q9NYP8 219 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 SCGB1D4Q6XE38 83 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 VMO1Q7Z5L0 202 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 STHQ8IWL8 128 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 OSR1Q8TAX0 266 aaPredicted RBP11.33□□□□□ -0.6
RFFL-201ENST00000315249 NIT2Q9NQR4 276 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 SRCAPQ6ZRS2 3230 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 IER3P46695 156 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 DLK1P80370 383 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 ZNF56Q15929 161 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 LINC00114Q6XXX2 140 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 TAF15Q92804 592 aaKnown RBP eCLIP11.33□□□□□ -0.62e-6■■□□□ 11.9
RFFL-201ENST00000315249 C5orf66Q9H5L9 145 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 PTPRQQ9UMZ3 2332 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 ARL14EPLP0DKL9 152 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 FAM90A1Q86YD7 464 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 RBM38Q9H0Z9 239 aaKnown RBP11.33□□□□□ -0.6
RFFL-201ENST00000315249 SELENOKQ9Y6D0 94 aa11.33□□□□□ -0.6
RFFL-201ENST00000315249 NBR2O15453 112 aa11.32□□□□□ -0.6
RFFL-201ENST00000315249 CA2P00918 260 aa11.32□□□□□ -0.6
RFFL-201ENST00000315249 MFAP2P55001 183 aa11.32□□□□□ -0.6
RFFL-201ENST00000315249 HERVK_113P61574 105 aa11.32□□□□□ -0.6
RFFL-201ENST00000315249 SERF2P84101 59 aa11.32□□□□□ -0.6
RFFL-201ENST00000315249 PMS2P11Q13670 270 aa11.32□□□□□ -0.6
RFFL-201ENST00000315249 OR10C1Q96KK4 312 aa11.32□□□□□ -0.6
RFFL-201ENST00000315249 DUX3Q96PT4 197 aa11.32□□□□□ -0.6
RFFL-201ENST00000315249 WNT10AQ9GZT5 417 aa11.32□□□□□ -0.6
RFFL-201ENST00000315249 ZNF253O75346 499 aa11.32□□□□□ -0.6
RFFL-201ENST00000315249 NDUFB4O95168 129 aa11.32□□□□□ -0.6
RFFL-201ENST00000315249 ANOS1P23352 680 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms