RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 VN1R17PQ8TDU5 208 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 LINC00312Q9Y6C7 94 aa7.53□□□□□ -1.2
COL6A5-202ENST00000312481 LINC00587B1AMM8 73 aa7.52□□□□□ -1.2
COL6A5-202ENST00000312481 EGR4Q05215 589 aa7.52□□□□□ -1.2
COL6A5-202ENST00000312481 PRSS41Q7RTY9 318 aa7.52□□□□□ -1.2
COL6A5-202ENST00000312481 SLC25A28Q96A46 364 aa7.52□□□□□ -1.2
COL6A5-202ENST00000312481 TMEM106BQ9NUM4 274 aa7.52□□□□□ -1.2
COL6A5-202ENST00000312481 C2CD4DB7Z1M9 353 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 RND2P52198 227 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 RALYQ9UKM9 306 aaKnown RBP7.52□□□□□ -1.21
COL6A5-202ENST00000312481 CKS2P33552 79 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 ZNF385CQ66K41 422 aaPredicted RBP7.52□□□□□ -1.21
COL6A5-202ENST00000312481 MOB3BQ86TA1 216 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 SGK494Q96LW2 274 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 PRELID3AQ96N28 172 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 DLL3Q9NYJ7 618 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 MYO18BQ8IUG5 2567 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 SS18L1O75177 396 aaPredicted RBP7.52□□□□□ -1.21
COL6A5-202ENST00000312481 SMAD2Q15796 467 aaKnown RBP7.52□□□□□ -1.21
COL6A5-202ENST00000312481 KLHDC2Q9Y2U9 406 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 ZG16O60844 167 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 PLP1P60201 277 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 ORMDL3Q8N138 153 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 MISP3Q96FF7 219 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 TMEM140Q9NV12 185 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 B9A039 149 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 REG1AP05451 166 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 SRSF9Q13242 221 aaKnown RBP eCLIP7.52□□□□□ -1.21
COL6A5-202ENST00000312481 UNC119Q13432 240 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 TBR1Q16650 682 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 ASCL4Q6XD76 172 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 NDUFB4O95168 129 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 EFEMP2O95967 443 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 SMIM13P0DJ93 91 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 OTX1P32242 354 aaPredicted RBP7.52□□□□□ -1.21
COL6A5-202ENST00000312481 Q1RN00 199 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 FAM222BQ8WU58 562 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 SLC50A1Q9BRV3 221 aa7.52□□□□□ -1.21
COL6A5-202ENST00000312481 MOSPD3O75425 235 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 GNB1P62873 340 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 TMEM189A5PLL7 270 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 OR2H2O95918 312 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 MRPL14Q6P1L8 145 aaKnown RBP7.51□□□□□ -1.21
COL6A5-202ENST00000312481 NIT1Q86X76 327 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 OR10J6PQ8NGY7 276 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 TCF19Q9Y242 345 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 VHLLQ6RSH7 139 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 ZNF497Q6ZNH5 498 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 ISOC2Q96AB3 205 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 ZNF414Q96IQ9 312 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 RTBDNQ9BSG5 229 aaPredicted RBP7.51□□□□□ -1.21
COL6A5-202ENST00000312481 DERL1Q9BUN8 251 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 ORMDL2Q53FV1 153 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 OPN3Q9H1Y3 402 aaPredicted RBP7.51□□□□□ -1.21
COL6A5-202ENST00000312481 ADRA2AP08913 450 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 DLX6P56179 175 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 OR10S1Q8NGN2 331 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 A0A0G2JLM5 398 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 TMPRSS2O15393 492 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 RBP4P02753 201 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 RPS27P42677 84 aaKnown RBP7.51□□□□□ -1.21
COL6A5-202ENST00000312481 C1QL3Q5VWW1 255 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 CT55Q8WUE5 264 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 RPRMQ9NS64 109 aa7.51□□□□□ -1.21
COL6A5-202ENST00000312481 IGHV3-20A0A0C4DH32 117 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 CDIPTO14735 213 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 GCHFRP30047 84 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 HIST1H1AQ02539 215 aaPredicted RBP7.5□□□□□ -1.21
COL6A5-202ENST00000312481 Q5PR19 223 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 ZNF324BQ6AW86 544 aaPredicted RBP7.5□□□□□ -1.21
COL6A5-202ENST00000312481 CALYQ9NYX4 217 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 IDI2-AS1Q9NZ38 188 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 FOXA2Q9Y261 457 aaPredicted RBP7.5□□□□□ -1.21
COL6A5-202ENST00000312481 FAM208BQ5VWN6 2430 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 CCL11P51671 97 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 FGF8P55075 233 aaPredicted RBP7.5□□□□□ -1.21
COL6A5-202ENST00000312481 AICDAQ9GZX7 198 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 TRAV9-2A0A087WT02 112 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 A1L4Q6 167 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 GFRALQ6UXV0 394 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 SPNS3Q6ZMD2 512 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 C5orf30Q96GV9 206 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 ASCL3Q9NQ33 180 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 OR4C46A6NHA9 309 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 C15orf61A6NNL5 157 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 LY6G6FQ5SQ64 297 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 PMS2CLQ68D20 193 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 RAMP1O60894 148 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 FAM221AA4D161 298 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 HIST1H2BKO60814 126 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 HIST1H2BJP06899 126 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 RD3LP0DJH9 198 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 HIST1H2BOP23527 126 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 HIST1H2BBP33778 126 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 HIST1H2BDP58876 126 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 HIST1H2BCP62807 126 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 HIST2H2BEQ16778 126 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.5□□□□□ -1.21
COL6A5-202ENST00000312481 BIVMQ86UB2 503 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms