RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CCL21O00585 134 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 TMEM170AQ8WVE7 144 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 TM2D1Q9BX74 207 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 A0A1B0GW15 77 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 H3BUT2 72 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 SERF1AO75920 110 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 IFI27L2Q9H2X8 130 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 SMIM10L1P0DMW3 83 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 TFF3Q07654 80 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 SMIM10Q96HG1 83 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 SCGB3A1Q96QR1 104 aa11.63□□□□□ -0.55
CLCN6-201ENST00000312413 RTBDNQ9BSG5 229 aaPredicted RBP11.63□□□□□ -0.55
CLCN6-201ENST00000312413 RPP21Q9H633 154 aaKnown RBP11.63□□□□□ -0.55
CLCN6-201ENST00000312413 PPIAL4CA0A0B4J2A2 164 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 PPIAL4GP0DN37 164 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 ATP5G2Q06055 141 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 CABIN1Q9Y6J0 2220 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 APOMO95445 188 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 CSRP3P50461 194 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 RPL23P62829 140 aaKnown RBP11.62□□□□□ -0.55
CLCN6-201ENST00000312413 EGR4Q05215 589 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 OR5P3Q8WZ94 311 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 IZUMO1RA6ND01 250 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 WDR82Q6UXN9 313 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 ZNF318Q5VUA4 2279 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 CACNG7P62955 275 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 TFF2Q03403 129 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 Q6AWC8 147 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 C1QL2Q7Z5L3 287 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 SLC22A18ASQ8N1D0 253 aa11.62□□□□□ -0.55
CLCN6-201ENST00000312413 FAM181BA6NEQ2 426 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 PATE3B3GLJ2 98 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 THY1P04216 161 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 IGKV3OR2-268A0A0C4DH90 116 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 IGFBP2P18065 325 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 SPRED2Q7Z698 418 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 MEGF9Q9H1U4 602 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 C5orf67F2Z3F1 127 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 J3QW42 95 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 TMEM50AO95807 157 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 DMRTA2Q96SC8 542 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 CLEC7AQ9BXN2 247 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 LOC101059948A0A1B0GTJ6 334 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 ATXN7O15265 892 aaPredicted RBP11.61□□□□□ -0.55
CLCN6-201ENST00000312413 IL9P15248 144 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 BEND2Q8NDZ0 799 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 TMEM54Q969K7 222 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 EEF1AKMT3Q96AZ1 226 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 SRXN1Q9BYN0 137 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 TMEM106BQ9NUM4 274 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 NPFFO15130 113 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 RPL39P5Q59GN2 51 aa11.61□□□□□ -0.55
CLCN6-201ENST00000312413 PSMB11A5LHX3 300 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 H7C1H1 209 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 M0R381 172 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 ORMDL3Q8N138 153 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 DPH3Q96FX2 82 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 FMC1Q96HJ9 113 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 ABCA3Q99758 1704 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 MARF1Q9Y4F3 1742 aaKnown RBP11.6□□□□□ -0.55
CLCN6-201ENST00000312413 SPTBP11277 2137 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 CEACAM4O75871 244 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 SFTPCP11686 197 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 PLAURQ03405 335 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 MESP2Q0VG99 397 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 ACSF3Q4G176 576 aaPredicted RBP11.6□□□□□ -0.55
CLCN6-201ENST00000312413 ZNF525Q8N782 197 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 OSR1Q8TAX0 266 aaPredicted RBP11.6□□□□□ -0.55
CLCN6-201ENST00000312413 TMEM95Q3KNT9 176 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 FBLN7Q53RD9 439 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 CLEC2AQ6UVW9 174 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 TEX45Q8NA69 505 aa11.6□□□□□ -0.55
CLCN6-201ENST00000312413 TNRC6CQ9HCJ0 1690 aaKnown RBP11.6□□□□□ -0.55
CLCN6-201ENST00000312413 IGHV3-35A0A0C4DH35 117 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 C12orf77C9JDV5 145 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 UBE2CO00762 179 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 CIARTQ8N365 385 aaPredicted RBP11.59□□□□□ -0.55
CLCN6-201ENST00000312413 LINC00614P0C842 121 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 SNRPD3P62318 126 aaKnown RBP11.59□□□□□ -0.55
CLCN6-201ENST00000312413 A0A1B0GTI1 187 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 C9JCJ5 164 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 TBX6O95947 436 aaPredicted RBP11.59□□□□□ -0.55
CLCN6-201ENST00000312413 ASIPP42127 132 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 IGLV3-21P80748 117 aaPredicted RBP11.59□□□□□ -0.55
CLCN6-201ENST00000312413 ZNF124Q15973 351 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 OR52E5Q8NH55 327 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 TIMP4Q99727 224 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 ZNF257Q9Y2Q1 563 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HS3ST3B1Q9Y662 390 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HIST1H2BKO60814 126 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HIST1H2BJP06899 126 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HIST1H2BOP23527 126 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HIST1H2BBP33778 126 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HIST1H2BDP58876 126 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HIST1H2BCP62807 126 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HIST2H2BEQ16778 126 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HIST1H2BHQ93079 126 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HIST1H2BNQ99877 126 aa11.59□□□□□ -0.55
CLCN6-201ENST00000312413 HIST1H2BMQ99879 126 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms