RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TMEM229AB2RXF0 380 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 IGKV3-11P04433 115 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 TUBA4BQ9H853 241 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 KLK2P20151 261 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 ZNF79Q15937 498 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 CRPP02741 224 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 COX5BP10606 129 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 GOLT1AQ6ZVE7 132 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 BIVMQ86UB2 503 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 GPR146Q96CH1 333 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 CCL19Q99731 98 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 LTBP4Q8N2S1 1624 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 RUNX1Q01196 453 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 ZNF721Q8TF20 911 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 SLC25A2Q9BXI2 301 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 PRSS53Q2L4Q9 553 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 ZNF324BQ6AW86 544 aaPredicted RBP13.29□□□□□ -0.28
HCFC1-201ENST00000310441 MYEOVQ96EZ4 313 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 RNF115Q9Y4L5 304 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 CXCL2P19875 107 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 RIF1Q5UIP0 2472 aaKnown RBP13.29□□□□□ -0.28
HCFC1-201ENST00000310441 LINC00305Q7Z4B0 112 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 UCN2Q96RP3 112 aa13.29□□□□□ -0.28
HCFC1-201ENST00000310441 TFPI2P48307 235 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 VWA8A3KMH1 1905 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 PGLYRP1O75594 196 aaPredicted RBP13.28□□□□□ -0.28
HCFC1-201ENST00000310441 MGAT2Q10469 447 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 ZNF660Q6AZW8 331 aaPredicted RBP13.28□□□□□ -0.28
HCFC1-201ENST00000310441 DRD3P35462 400 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 CCL13Q99616 98 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 MYF5P13349 255 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 CCL8P80075 99 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 SELENOHQ8IZQ5 122 aaKnown RBP13.28□□□□□ -0.28
HCFC1-201ENST00000310441 TRAV8-6A0A0B4J262 113 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 LINC01565O15544 149 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 TMEM74BQ9NUR3 256 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 LOC105371242A0A075B767 164 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 TRBV5-5A0A0J9YX44 114 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 EIF3GO75821 320 aaKnown RBP eCLIP13.28□□□□□ -0.28
HCFC1-201ENST00000310441 TBR1Q16650 682 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 OR4X2Q8NGF9 303 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 TMEM86BQ8N661 226 aa13.28□□□□□ -0.28
HCFC1-201ENST00000310441 PSMB11A5LHX3 300 aa13.27□□□□□ -0.28
HCFC1-201ENST00000310441 MYOD1P15172 320 aa13.27□□□□□ -0.28
HCFC1-201ENST00000310441 GLI3P10071 1580 aa13.27□□□□□ -0.28
HCFC1-201ENST00000310441 LOC390937A0A1W2PQ73 354 aa13.27□□□□□ -0.28
HCFC1-201ENST00000310441 PMS2CLQ68D20 193 aa13.27□□□□□ -0.28
HCFC1-201ENST00000310441 SEMA5BQ9P283 1151 aa13.27□□□□□ -0.28
HCFC1-201ENST00000310441 PEX7O00628 323 aa13.27□□□□□ -0.28
HCFC1-201ENST00000310441 CTSSP25774 331 aa13.27□□□□□ -0.29
HCFC1-201ENST00000310441 C5orf30Q96GV9 206 aa13.27□□□□□ -0.29
HCFC1-201ENST00000310441 GPR132Q9UNW8 380 aa13.27□□□□□ -0.29
HCFC1-201ENST00000310441 TBL2Q9Y4P3 447 aaKnown RBP13.27□□□□□ -0.29
HCFC1-201ENST00000310441 NPDC1Q9NQX5 325 aaPredicted RBP13.27□□□□□ -0.29
HCFC1-201ENST00000310441 TMEM91Q6ZNR0 172 aa13.27□□□□□ -0.29
HCFC1-201ENST00000310441 EAF1Q96JC9 268 aaPredicted RBP13.27□□□□□ -0.29
HCFC1-201ENST00000310441 PPIAL4CA0A0B4J2A2 164 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 B9A039 149 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 PPIAL4GP0DN37 164 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 CRYBB3P26998 211 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 PDLIM4P50479 330 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 RNASEH2CQ8TDP1 164 aaKnown RBP13.26□□□□□ -0.29
HCFC1-201ENST00000310441 ELOVL5Q9NYP7 299 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 DENND4AQ7Z401 1863 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 ERGP11308 486 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 RTN4RQ9BZR6 473 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 LINC00587B1AMM8 73 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 CDK2AP2O75956 126 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 Q5PR19 223 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 S100A7L2Q5SY68 101 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 OR5AN1Q8NGI8 311 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.26□□□□□ -0.29
HCFC1-201ENST00000310441 TRAV8-2A0A0B4J237 113 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 IGHMP01871 453 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 C2orf68Q2NKX9 166 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 CACNG8Q8WXS5 425 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 CITED2Q99967 270 aaPredicted RBP13.26□□□□□ -0.29
HCFC1-201ENST00000310441 DERL1Q9BUN8 251 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 IFI27P40305 119 aaPredicted RBP13.26□□□□□ -0.29
HCFC1-201ENST00000310441 FAM60AQ9NP50 221 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 F12P00748 615 aaPredicted RBP13.26□□□□□ -0.29
HCFC1-201ENST00000310441 VSIG10L2P0DP72 767 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 RND3P61587 244 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 C1orf100Q5SVJ3 147 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 ANAPC13Q9BS18 74 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 IL36BQ9NZH7 164 aa13.26□□□□□ -0.29
HCFC1-201ENST00000310441 SCTP09683 121 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 CTAG1AP78358 180 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 TMEM95Q3KNT9 176 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 GGTLC3B5MD39 225 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 CD8AP01732 235 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 PPP1R3EQ9H7J1 279 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 PSG4Q00888 419 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 A0A1W2PP11 408 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 FXYD3Q14802 87 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 WDR82Q6UXN9 313 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 LOXL4Q96JB6 756 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 IMMP2LQ96T52 175 aa13.25□□□□□ -0.29
HCFC1-201ENST00000310441 NABP2Q9BQ15 211 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms