RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SMIM13P0DJ93 91 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 ATOH7Q8N100 152 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 OR10J6PQ8NGY7 276 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 HIST1H2BKO60814 126 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 HIST1H2BJP06899 126 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 HIST1H2BOP23527 126 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 HIST1H2BBP33778 126 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 HIST1H2BDP58876 126 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 HIST1H2BCP62807 126 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 HIST2H2BEQ16778 126 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.21□□□□□ -0.61
SNED1-201ENST00000310397 AMMECR1LQ6DCA0 310 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 HIST1H2BHQ93079 126 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 KCNS1Q96KK3 526 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 HIST1H2BNQ99877 126 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 HIST1H2BMQ99879 126 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 MIEN1Q9BRT3 115 aa11.21□□□□□ -0.61
SNED1-201ENST00000310397 A1L4Q6 167 aa11.21□□□□□ -0.62
SNED1-201ENST00000310397 FAM90A27PA6NNH2 459 aa11.21□□□□□ -0.62
SNED1-201ENST00000310397 KLF14Q8TD94 323 aaPredicted RBP11.21□□□□□ -0.62
SNED1-201ENST00000310397 A0A1B0GV72 72 aa11.21□□□□□ -0.62
SNED1-201ENST00000310397 RND2P52198 227 aa11.21□□□□□ -0.62
SNED1-201ENST00000310397 MUC15Q8N387 334 aa11.21□□□□□ -0.62
SNED1-201ENST00000310397 PLXNA4Q9HCM2 1894 aa11.21□□□□□ -0.62
SNED1-201ENST00000310397 FRMPD3Q5JV73 1810 aa11.21□□□□□ -0.62
SNED1-201ENST00000310397 ABHD12Q8N2K0 398 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 GP6Q9HCN6 339 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 PHLDA3Q9Y5J5 127 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 R4GN57 208 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 TMEM131Q92545 1883 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 C17orf51A8MQB3 221 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 TMEM170AQ8WVE7 144 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 NEUROG1Q92886 237 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 ZNF414Q96IQ9 312 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 CCL13Q99616 98 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 CD5P06127 495 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 TBR1Q16650 682 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 TTC32Q5I0X7 151 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 ZNF441Q8N8Z8 693 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 LOC101059948A0A1B0GTJ6 334 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 hCG_38984A0A1B0GV85 526 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 ICAM4Q14773 271 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 SYT8Q8NBV8 401 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 C18orf12Q96KH6 178 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 C16orf92Q96LL3 132 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 ALPK3Q96L96 1907 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 A0A1W2PS18 150 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 MFAP4P55083 255 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 HCP5Q6MZN7 132 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 ZNF826PQ6ZT77 177 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 FAM131CQ96AQ9 280 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 IGHV3-21A0A0B4J1V1 117 aa11.2□□□□□ -0.62
SNED1-201ENST00000310397 SYNGR3O43761 229 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 TFF2Q03403 129 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 C2orf83Q53S99 150 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 GLRX5Q86SX6 157 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 PLAUP00749 431 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 CCL8P80075 99 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 SAPCD1Q5SSQ6 148 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 MAFAQ8NHW3 353 aaPredicted RBP11.19□□□□□ -0.62
SNED1-201ENST00000310397 A0A1B0GW15 77 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 SS18L1O75177 396 aaPredicted RBP11.19□□□□□ -0.62
SNED1-201ENST00000310397 CELA2AP08217 269 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 GAS1P54826 345 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 FSCN3Q9NQT6 498 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 RBFOX2O43251 390 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNED1-201ENST00000310397 SRXN1Q9BYN0 137 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.19□□□□□ -0.62
SNED1-201ENST00000310397 SLC25A28Q96A46 364 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 TMEM186Q96B77 213 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 FAM117AQ9C073 453 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 SLC25A45Q8N413 288 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 SMOC1Q9H4F8 434 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 HS3ST3B1Q9Y662 390 aa11.19□□□□□ -0.62
SNED1-201ENST00000310397 PLXNA2O75051 1894 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 Q6AWC8 147 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 MED13LQ71F56 2210 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 PCNX2A6NKB5 2137 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 SLC25A17O43808 307 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 RPL23P62829 140 aaKnown RBP11.18□□□□□ -0.62
SNED1-201ENST00000310397 DNM1P46Q6ZS02 220 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 CLDN16Q9Y5I7 305 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 FAM106CPP0CH98 169 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 FCGR2BP31994 310 aaPredicted RBP11.18□□□□□ -0.62
SNED1-201ENST00000310397 ARF6P62330 175 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 SHISA5Q8N114 240 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 OR4D5Q8NGN0 318 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 CACNG8Q8WXS5 425 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 GTF3AQ92664 365 aaKnown RBP11.18□□□□□ -0.62
SNED1-201ENST00000310397 A0A1B0GUT8 65 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 GDF9O60383 454 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 ECSCRQ19T08 205 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 VKORC1L1Q8N0U8 176 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 ITLN1Q8WWA0 313 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 COX6A1P12074 109 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 C14orf144Q96I85 54 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 RTN4RQ9BZR6 473 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 WNT10AQ9GZT5 417 aa11.18□□□□□ -0.62
SNED1-201ENST00000310397 PPP1R17O96001 155 aa11.17□□□□□ -0.62
SNED1-201ENST00000310397 ADRA2AP08913 450 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms