RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 ITLN1Q8WWA0 313 aa12.48□□□□□ -0.41
CSDC2-201ENST00000306149 TMEM18Q96B42 140 aa12.48□□□□□ -0.41
CSDC2-201ENST00000306149 RBM14Q96PK6 669 aaKnown RBP12.48□□□□□ -0.41
CSDC2-201ENST00000306149 MGST2Q99735 147 aa12.48□□□□□ -0.41
CSDC2-201ENST00000306149 C1QTNF9P0C862 333 aa12.48□□□□□ -0.41
CSDC2-201ENST00000306149 IL3RAP26951 378 aa12.48□□□□□ -0.41
CSDC2-201ENST00000306149 VDAC2P45880 294 aaPredicted RBP12.48□□□□□ -0.41
CSDC2-201ENST00000306149 ERVK-16P61578 105 aa12.48□□□□□ -0.41
CSDC2-201ENST00000306149 PDLIM3Q53GG5 364 aaPredicted RBP12.48□□□□□ -0.41
CSDC2-201ENST00000306149 ZNF664Q8N3J9 261 aa12.48□□□□□ -0.41
CSDC2-201ENST00000306149 HINT2Q9BX68 163 aa12.48□□□□□ -0.41
CSDC2-201ENST00000306149 JPT1Q9UK76 154 aa12.48□□□□□ -0.41
CSDC2-201ENST00000306149 PKDREJQ9NTG1 2253 aa12.48□□□□□ -0.41
CSDC2-201ENST00000306149 CCKARP32238 428 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 RPL15P61313 204 aaKnown RBP12.47□□□□□ -0.41
CSDC2-201ENST00000306149 FAM78BQ5VT40 261 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 IGFL2Q6UWQ7 119 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 CALYQ9NYX4 217 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 YPEL1O60688 119 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 NDUFB7P17568 137 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 CNN1P51911 297 aaKnown RBP12.47□□□□□ -0.41
CSDC2-201ENST00000306149 ARL6IP6Q8N6S5 226 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 YPEL2Q96QA6 119 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 TXNDC17Q9BRA2 123 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 C2orf88Q9BSF0 95 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 TCF19Q9Y242 345 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 PXMP4Q9Y6I8 212 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 KALRNO60229 2985 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 OPRK1P41145 380 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 TAS2R60P59551 318 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 RPP30P78346 268 aaKnown RBP12.47□□□□□ -0.41
CSDC2-201ENST00000306149 CT45A1Q5HYN5 189 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 ZNF474Q6S9Z5 364 aaPredicted RBP12.47□□□□□ -0.41
CSDC2-201ENST00000306149 CT45A3Q8NHU0 189 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 FAM216AQ8WUB2 273 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 C1orf159Q96HA4 380 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 WFIKKN1Q96NZ8 548 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 NDUFAF3Q9BU61 184 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 GGTLC1Q9BX51 225 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 ZNRD1Q9P1U0 126 aa12.47□□□□□ -0.41
CSDC2-201ENST00000306149 AHRRA9YTQ3 701 aa12.46□□□□□ -0.41
CSDC2-201ENST00000306149 SPATA31B1PQ5VZV4 182 aa12.46□□□□□ -0.41
CSDC2-201ENST00000306149 C22orf34Q6ZV56 151 aa12.46□□□□□ -0.41
CSDC2-201ENST00000306149 GBGT1Q8N5D6 347 aa12.46□□□□□ -0.41
CSDC2-201ENST00000306149 TRBV20OR9-2A0A075B6H5 130 aa12.46□□□□□ -0.42
CSDC2-201ENST00000306149 PRSS46E5RG02 174 aa12.46□□□□□ -0.42
CSDC2-201ENST00000306149 GNG10P50151 68 aa12.46□□□□□ -0.42
CSDC2-201ENST00000306149 FOXL1Q12952 345 aa12.46□□□□□ -0.42
CSDC2-201ENST00000306149 BEND2Q8NDZ0 799 aa12.46□□□□□ -0.42
CSDC2-201ENST00000306149 PPP1R35Q8TAP8 253 aa12.46□□□□□ -0.42
CSDC2-201ENST00000306149 SNRNP40Q96DI7 357 aaKnown RBP12.46□□□□□ -0.42
CSDC2-201ENST00000306149 CHODLQ9H9P2 273 aa12.46□□□□□ -0.42
CSDC2-201ENST00000306149 PARD6AQ9NPB6 346 aa12.46□□□□□ -0.42
CSDC2-201ENST00000306149 ZFHX2Q9C0A1 2572 aaPredicted RBP12.46□□□□□ -0.42
CSDC2-201ENST00000306149 SAA2-SAA4A0A096LPE2 208 aa12.45□□□□□ -0.42
CSDC2-201ENST00000306149 A0A0U1RQK1 487 aa12.45□□□□□ -0.42
CSDC2-201ENST00000306149 SAA2P0DJI9 122 aaPredicted RBP12.45□□□□□ -0.42
CSDC2-201ENST00000306149 C17orf58Q2M2W7 97 aa12.45□□□□□ -0.42
CSDC2-201ENST00000306149 LYG1Q8N1E2 194 aa12.45□□□□□ -0.42
CSDC2-201ENST00000306149 OR52E5Q8NH55 327 aa12.45□□□□□ -0.42
CSDC2-201ENST00000306149 FAM122AQ96E09 287 aa12.45□□□□□ -0.42
CSDC2-201ENST00000306149 SEPSECSQ9HD40 501 aaKnown RBP12.45□□□□□ -0.42
CSDC2-201ENST00000306149 TUBG2Q9NRH3 451 aa12.45□□□□□ -0.42
CSDC2-201ENST00000306149 DSCAML1Q8TD84 2053 aa12.45□□□□□ -0.42
CSDC2-201ENST00000306149 ANKRD11Q6UB99 2663 aaPredicted RBP12.45□□□□□ -0.42
CSDC2-201ENST00000306149 A0A1B0GWJ7 208 aa12.45□□□□□ -0.42
CSDC2-201ENST00000306149 F2RL2O00254 374 aa12.45□□□□□ -0.42
CSDC2-201ENST00000306149 RBFOX2O43251 390 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSDC2-201ENST00000306149 KLF3P57682 345 aaPredicted RBP12.45□□□□□ -0.42
CSDC2-201ENST00000306149 TMPRSS3P57727 454 aa12.45□□□□□ -0.42
CSDC2-201ENST00000306149 ARSJQ5FYB0 599 aaPredicted RBP12.45□□□□□ -0.42
CSDC2-201ENST00000306149 SCO2A0A1W2PP80 73 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 ZNF705GA8MUZ8 300 aaPredicted RBP12.44□□□□□ -0.42
CSDC2-201ENST00000306149 MZT1Q08AG7 82 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 PIP4P1Q86T03 277 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 SFRP2Q96HF1 295 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 ACACAQ13085 2346 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 FOXH1O75593 365 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 MMP23AO75900 390 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 STAG3L2P0CL84 134 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 STAG3L3P0CL85 134 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 SSX2Q16385 188 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 C21orf62-AS1Q17RA5 79 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 OR4A47Q6IF82 309 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 MRPL41Q8IXM3 137 aaKnown RBP12.44□□□□□ -0.42
CSDC2-201ENST00000306149 DDB2Q92466 427 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 TP53TG5Q9Y2B4 290 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 TRAPPC1Q9Y5R8 145 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 ZNF292O60281 2723 aa12.44□□□□□ -0.42
CSDC2-201ENST00000306149 A0A1B0GUS0 222 aa12.43□□□□□ -0.42
CSDC2-201ENST00000306149 ZNF320A2RRD8 509 aa12.43□□□□□ -0.42
CSDC2-201ENST00000306149 THBS3P49746 956 aa12.43□□□□□ -0.42
CSDC2-201ENST00000306149 CYB5R2Q6BCY4 276 aa12.43□□□□□ -0.42
CSDC2-201ENST00000306149 YTHDF2Q9Y5A9 579 aaKnown RBP12.43□□□□□ -0.42
CSDC2-201ENST00000306149 CXorf1O96002 111 aa12.43□□□□□ -0.42
CSDC2-201ENST00000306149 CR1LQ2VPA4 569 aa12.43□□□□□ -0.42
CSDC2-201ENST00000306149 MOB3BQ86TA1 216 aa12.43□□□□□ -0.42
CSDC2-201ENST00000306149 CCL13Q99616 98 aa12.43□□□□□ -0.42
CSDC2-201ENST00000306149 ELOVL5Q9NYP7 299 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms