RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 DOCK1Q14185 1865 aa11.52□□□□□ -0.56
TRIM56-201ENST00000306085 LTBP3Q9NS15 1303 aa11.52□□□□□ -0.56
TRIM56-201ENST00000306085 HOGA1Q86XE5 327 aa11.52□□□□□ -0.56
TRIM56-201ENST00000306085 MAFAQ8NHW3 353 aaPredicted RBP11.52□□□□□ -0.56
TRIM56-201ENST00000306085 KIAA1549Q9HCM3 1950 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 A0A1B0GUT8 65 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 TDHQ8IZJ6 230 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 SPINT1O43278 529 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 CA11O75493 328 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 HOXB1P14653 301 aaPredicted RBP11.52□□□□□ -0.57
TRIM56-201ENST00000306085 EPDR1Q9UM22 224 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 PATJQ8NI35 1801 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 SAMD5Q5TGI4 173 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 IMMP2LQ96T52 175 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 CLEC7AQ9BXN2 247 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 C2CD4DB7Z1M9 353 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 ATXN7O15265 892 aaPredicted RBP11.52□□□□□ -0.57
TRIM56-201ENST00000306085 GZMBP10144 247 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 TNFRSF9Q07011 255 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 UNC119Q13432 240 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 ICAM4Q14773 271 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 IFI27P40305 119 aaPredicted RBP11.52□□□□□ -0.57
TRIM56-201ENST00000306085 RND3P61587 244 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 LRTM2Q8N967 370 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 TMEM74BQ9NUR3 256 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 CASP8AP2Q9UKL3 1982 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 SCTP09683 121 aa11.52□□□□□ -0.57
TRIM56-201ENST00000306085 INS-IGF2F8WCM5 200 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 SMAD7O15105 426 aaKnown RBP11.51□□□□□ -0.57
TRIM56-201ENST00000306085 INSP01308 110 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 HMGA1P17096 107 aaKnown RBP11.51□□□□□ -0.57
TRIM56-201ENST00000306085 SPEM1Q8N4L4 309 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 SPTY2D1-AS1A0A0U1RR47 76 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 OGG1O15527 345 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 NTN1O95631 604 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 LINC00158P58513 81 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 TRA2AQ13595 282 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRIM56-201ENST00000306085 A0A1W2PRX2 142 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 GPR146Q96CH1 333 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 VSIG8P0DPA2 414 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 LINC00615Q96LM1 132 aaPredicted RBP11.51□□□□□ -0.57
TRIM56-201ENST00000306085 EML6Q6ZMW3 1958 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 HOXB3P14651 431 aaPredicted RBP11.51□□□□□ -0.57
TRIM56-201ENST00000306085 TIMM23BQ5SRD1 257 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 C1QL3Q5VWW1 255 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 GGTLC1Q9BX51 225 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 MRPS18BQ9Y676 258 aaKnown RBP11.51□□□□□ -0.57
TRIM56-201ENST00000306085 PLXNB2O15031 1838 aa11.51□□□□□ -0.57
TRIM56-201ENST00000306085 CCL19Q99731 98 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 SEPSECSQ9HD40 501 aaKnown RBP11.5□□□□□ -0.57
TRIM56-201ENST00000306085 S4R3C0 116 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 CALYQ9NYX4 217 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 ORMDL3Q8N138 153 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 ARFGEF1Q9Y6D6 1849 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 INO80CQ6PI98 192 aaPredicted RBP11.5□□□□□ -0.57
TRIM56-201ENST00000306085 CD300LDQ6UXZ3 194 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 SHISA5Q8N114 240 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 ZNF625Q96I27 306 aaPredicted RBP11.5□□□□□ -0.57
TRIM56-201ENST00000306085 FXYD1O00168 92 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 ZNF415Q09FC8 603 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 MRPL32Q9BYC8 188 aaKnown RBP11.5□□□□□ -0.57
TRIM56-201ENST00000306085 LOC105371267A0A1B0GV96 52 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 GREB1Q4ZG55 1949 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 ZNF818PQ6ZRF7 136 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 COQ2Q96H96 371 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 CD28P10747 220 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 RIPPLY2Q5TAB7 128 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 ST6GALNAC2Q9UJ37 374 aa11.5□□□□□ -0.57
TRIM56-201ENST00000306085 ITGB1BP1O14713 200 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 NCR2O95944 276 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 CT62P0C5K7 136 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 VAX1Q5SQQ9 334 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 KBTBD11-OT1A0A1B0GTJ5 212 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 TBR1Q16650 682 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 SF3B5Q9BWJ5 86 aaKnown RBP11.49□□□□□ -0.57
TRIM56-201ENST00000306085 RSPO3Q9BXY4 272 aaPredicted RBP11.49□□□□□ -0.57
TRIM56-201ENST00000306085 ZNHIT1O43257 154 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 FDCSPQ8NFU4 85 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 OR11H4Q8NGC9 324 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 GCHFRP30047 84 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 RBM38Q9H0Z9 239 aaKnown RBP11.49□□□□□ -0.57
TRIM56-201ENST00000306085 P2RY6Q15077 328 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 NPCDR1Q9BY65 106 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 MIXL1Q9H2W2 232 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 ZG16O60844 167 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 OR2H2O95918 312 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 LRP6O75581 1613 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 ABCA3Q99758 1704 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 RGPD4Q7Z3J3 1758 aa11.49□□□□□ -0.57
TRIM56-201ENST00000306085 TRGV3P03979 118 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 GLULP15104 373 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 SSBP2P81877 361 aaPredicted RBP11.48□□□□□ -0.57
TRIM56-201ENST00000306085 FBXW9Q5XUX1 488 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 TMEM252Q8N6L7 170 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 ANK1P16157 1881 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 PRB3Q04118 309 aaPredicted RBP11.48□□□□□ -0.57
TRIM56-201ENST00000306085 LHX9Q9NQ69 397 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 DOPEY1Q5JWR5 2465 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 CLPSL1A2RUU4 121 aa11.48□□□□□ -0.57
TRIM56-201ENST00000306085 DPM2O94777 84 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms