RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 SLC39A9Q9NUM3 307 aa8.42□□□□□ -1.06
FOXN4-201ENST00000299162 LIN7CQ9NUP9 197 aaKnown RBP8.42□□□□□ -1.06
FOXN4-201ENST00000299162 SPG11Q96JI7 2443 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 A0A1W2PN81 502 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 AHRRA9YTQ3 701 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 GOSR1O95249 250 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 TMEM95Q3KNT9 176 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 TCF23Q7RTU1 214 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 LINC00596Q86U02 117 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 TNFRSF14Q92956 283 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 PLSCR4Q9NRQ2 329 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 POLR3KQ9Y2Y1 108 aaPredicted RBP8.41□□□□□ -1.06
FOXN4-201ENST00000299162 PLXNB1O43157 2135 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 ANKHD1Q8IWZ3 2542 aaKnown RBP8.41□□□□□ -1.06
FOXN4-201ENST00000299162 A0A087WWC5 75 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 PGPEP1LA6NFU8 196 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 LINC00473A8K010 186 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 M0R1X1 148 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 ZG16O60844 167 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 HBE1P02100 147 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 BCL2P10415 239 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 COX5AP20674 150 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 CHRNB4P30926 498 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 BSXQ3C1V8 233 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 ZNF506Q5JVG8 444 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 FAM90A2PQ658T7 463 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 DPPA3Q6W0C5 159 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 RBMXL3Q8N7X1 1067 aaKnown RBP8.41□□□□□ -1.06
FOXN4-201ENST00000299162 K7EP13 123 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 PITX3O75364 302 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 ZNF737O75373 536 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 MDH2P40926 338 aaKnown RBP8.41□□□□□ -1.06
FOXN4-201ENST00000299162 KLF3P57682 345 aaPredicted RBP8.41□□□□□ -1.06
FOXN4-201ENST00000299162 RNF115Q9Y4L5 304 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 WIPI2Q9Y4P8 454 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 SLC25A15Q9Y619 301 aa8.41□□□□□ -1.06
FOXN4-201ENST00000299162 LOC102723971A0A1B0GUV8 181 aa8.4□□□□□ -1.06
FOXN4-201ENST00000299162 MAP1LC3B2A6NCE7 125 aa8.4□□□□□ -1.06
FOXN4-201ENST00000299162 GPR12P47775 334 aa8.4□□□□□ -1.06
FOXN4-201ENST00000299162 H2BFWTQ7Z2G1 175 aa8.4□□□□□ -1.06
FOXN4-201ENST00000299162 GNPNAT1Q96EK6 184 aaPredicted RBP8.4□□□□□ -1.06
FOXN4-201ENST00000299162 CCL13Q99616 98 aa8.4□□□□□ -1.06
FOXN4-201ENST00000299162 MAP1LC3BQ9GZQ8 125 aa8.4□□□□□ -1.06
FOXN4-201ENST00000299162 IGKV1D-17A0A075B6S4 117 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 OOEPA6NGQ2 149 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 SPINT2O43291 252 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 GGCTO75223 188 aaKnown RBP8.4□□□□□ -1.07
FOXN4-201ENST00000299162 NDUFB8O95169 186 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 HPRT1P00492 218 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 GYPAP02724 150 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 PPBPP02775 128 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 COL8A2P25067 703 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 ATP6V1FQ16864 119 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 TMEM241Q24JQ0 296 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 Q6ZS49 121 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 ZNF295-AS1Q8N0V1 137 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 ZNF709Q8N972 641 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 OR4C12Q96R67 309 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 IMMP2LQ96T52 175 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 ATP5SQ99766 215 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 SAMD10Q9BYL1 202 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 ARV1Q9H2C2 271 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 NAGKQ9UJ70 344 aa8.4□□□□□ -1.07
FOXN4-201ENST00000299162 ODAMA1E959 279 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 NUPR1O60356 82 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 MOB1BQ7L9L4 216 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 GCSAMQ8N6F7 178 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 SDF2L1Q9HCN8 221 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 TRAPPC1Q9Y5R8 145 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 FAM87AP0C7U9 286 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 KRTDAPP60985 99 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 BAXQ07812 192 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 FAM216BQ8N7L0 139 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 RNASEH2CQ8TDP1 164 aaKnown RBP8.39□□□□□ -1.07
FOXN4-201ENST00000299162 SELENOKQ9Y6D0 94 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 DSCAMO60469 2012 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 CLDN14O95500 239 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 GUSBP1Q15486 140 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 IGFL2Q6UWQ7 119 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 ASCL5Q7RTU5 278 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 ZNF645Q8N7E2 425 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 ST6GALNAC3Q8NDV1 305 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 BTF3L4Q96K17 158 aa8.39□□□□□ -1.07
FOXN4-201ENST00000299162 MBNL3Q9NUK0 354 aaKnown RBP8.39□□□□□ -1.07
FOXN4-201ENST00000299162 CGAP01215 116 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 GCGP01275 180 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 SLC38A11Q08AI6 406 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 CATR1Q13166 79 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 C1orf194Q5T5A4 169 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 GFRALQ6UXV0 394 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 HAPLN4Q86UW8 402 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 OR2T10Q8NGZ9 312 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 SRD5A3Q9H8P0 318 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 RYDENQ9NUL5 291 aaKnown RBP8.38□□□□□ -1.07
FOXN4-201ENST00000299162 KIR2DL5BA0A0G2JN68 375 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 KIR2DL5BA0A0G2JPC4 375 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 TMPRSS2O15393 492 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 MYOD1P15172 320 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 TNFAIP6P98066 277 aaPredicted RBP8.38□□□□□ -1.07
FOXN4-201ENST00000299162 ATOH7Q8N100 152 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms