RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 NABP1Q96AH0 204 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 NUDT11Q96G61 164 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 H0Y980 276 aa10.65□□□□□ -0.71
SLC6A1-201ENST00000287766 CXCL1P09341 107 aa10.65□□□□□ -0.71
SLC6A1-201ENST00000287766 CD33P20138 364 aa10.65□□□□□ -0.71
SLC6A1-201ENST00000287766 CCL20P78556 96 aa10.65□□□□□ -0.71
SLC6A1-201ENST00000287766 KRTCAP3Q53RY4 240 aa10.65□□□□□ -0.71
SLC6A1-201ENST00000287766 TCF23Q7RTU1 214 aa10.65□□□□□ -0.71
SLC6A1-201ENST00000287766 TMEM105Q8N8V8 129 aa10.65□□□□□ -0.71
SLC6A1-201ENST00000287766 PGLYRP4Q96LB8 373 aa10.65□□□□□ -0.71
SLC6A1-201ENST00000287766 WFDC1Q9HC57 220 aa10.65□□□□□ -0.71
SLC6A1-201ENST00000287766 SOX21Q9Y651 276 aaPredicted RBP10.65□□□□□ -0.71
SLC6A1-201ENST00000287766 WIPF3A6NGB9 483 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 DNLZQ5SXM8 178 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 PRNTQ86SH4 94 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 FAM222BQ8WU58 562 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 HIST1H4GQ99525 98 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 PRDM13Q9H4Q3 707 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 TMEM106BQ9NUM4 274 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 FAM157AC9JC47 383 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 J3QR06 171 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 AMBPP02760 352 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 BTF3P20290 206 aaKnown RBP10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 CCL1P22362 96 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 RPL31P62899 125 aaKnown RBP10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 SAMD13Q5VXD3 122 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 LEAP2Q969E1 77 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 PRDM14Q9GZV8 571 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 SEBOXQ9HB31 216 aaPredicted RBP10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 PPIAL4DF5H284 164 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 KLF3P57682 345 aaPredicted RBP10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 FBLN7Q53RD9 439 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 LHFPL1Q86WI0 220 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 TMEM70Q9BUB7 260 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 PAXXQ9BUH6 204 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 SDF2L1Q9HCN8 221 aa10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 FOXD3Q9UJU5 478 aaPredicted RBP10.64□□□□□ -0.71
SLC6A1-201ENST00000287766 FGF16O43320 207 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 ZG16O60844 167 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 S1PR2O95136 353 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 UCP2P55851 309 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 GTF3AQ92664 365 aaKnown RBP10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 WDYHV1Q96HA8 205 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 CXXC4Q9H2H0 198 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 ZNF256Q9Y2P7 627 aaPredicted RBP10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 NCOA6Q14686 2063 aaPredicted RBP10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 CELA3BP08861 270 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 NUBP1P53384 320 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 HGFACQ04756 655 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 OR5R1Q8NH85 324 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 PMCHL2Q9BQD1 86 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 FREM1Q5H8C1 2179 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 ZFHX2Q9C0A1 2572 aaPredicted RBP10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 ZNF716A6NP11 495 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 C21orf140B9A014 251 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 KLK10O43240 276 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 VKORC1L1Q8N0U8 176 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 A0A087WWC5 75 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 CA11O75493 328 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 LCN2P80188 198 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 SMAGPQ0VAQ4 97 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 TNXAQ16473 311 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 TXNDC17Q9BRA2 123 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 NRN1Q9NPD7 142 aa10.63□□□□□ -0.71
SLC6A1-201ENST00000287766 A0A0C4DFX4 3053 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 A0A1B0GWB2 263 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 PGPA6NDG6 321 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 OOEPA6NGQ2 149 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 H3BUT2 72 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 ADCYAP1P18509 176 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 CCL17Q92583 94 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 IGLV3-32A0A0A0MS00 114 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 EMP1P54849 157 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 RND1Q92730 232 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 SPCS1Q9Y6A9 102 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 PRR14LQ5THK1 2151 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 hADV38S2A0JD32 116 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 ANOS1P23352 680 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 RPL30P62888 115 aaKnown RBP10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 UNQ5815/PRO19632Q6UWF5 114 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 DRAM1Q8N682 238 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 OR1N2Q8NGR9 330 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 ZNF703Q9H7S9 590 aaPredicted RBP10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 HILPDAQ9Y5L2 63 aa10.62□□□□□ -0.71
SLC6A1-201ENST00000287766 ZNF106Q9H2Y7 1883 aaKnown RBP10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 H3BTX0 84 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 CKS2P33552 79 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 TMEM45BQ96B21 275 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 DCTN5Q9BTE1 182 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 REPIN1Q9BWE0 567 aaKnown RBP10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 C2orf16Q68DN1 1984 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 LOC102723996A0A087X1L8 192 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 AMY1AP04745 511 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 TYMSP04818 313 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 WBP1Q96G27 269 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 TMEM208Q9BTX3 173 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 FNDC4Q9H6D8 234 aaPredicted RBP10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 A1L4Q6 167 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 LINC00869P0C866 280 aa10.61□□□□□ -0.71
SLC6A1-201ENST00000287766 CRYGSP22914 178 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms