RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ZNF488Q96MN9 340 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 TMEM74BQ9NUR3 256 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 DXOO77932 396 aaKnown RBP7.5□□□□□ -1.21
NIPBL-201ENST00000282516 OR2H2O95918 312 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 LGALS1P09382 135 aaKnown RBP7.5□□□□□ -1.21
NIPBL-201ENST00000282516 HOXD3P31249 432 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-201ENST00000282516 Q6ZS52 159 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 SAXO1Q8IYX7 474 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 HYAL3O43820 417 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-201ENST00000282516 CXCL10P02778 98 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 ZNF600Q6ZNG1 722 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 DNM1P46Q6ZS02 220 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 VN1R4Q7Z5H5 301 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 LOC105371242A0A075B767 164 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 CRYBB3P26998 211 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 IFI27P40305 119 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-201ENST00000282516 SRSF4Q08170 494 aaKnown RBP7.5□□□□□ -1.21
NIPBL-201ENST00000282516 FAM57AQ8TBR7 257 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 TTTY12Q9BZ98 90 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 KBTBD11-OT1A0A1B0GTJ5 212 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 TGFAP01135 160 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 APOHP02749 345 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-201ENST00000282516 SAA1P0DJI8 122 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-201ENST00000282516 GAGE2EQ4V326 116 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 DCAF12L2Q5VW00 463 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 TMEM252Q8N6L7 170 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 MARVELD3Q96A59 401 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 NPCDR1Q9BY65 106 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 TLNRD1Q9H1K6 362 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 GAGE2DQ9UEU5 116 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 IGHV3-72A0A0B4J1Y9 119 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 REG1AP05451 166 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 CT62P0C5K7 136 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 WDR82Q6UXN9 313 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 MRPL20Q9BYC9 149 aaKnown RBP7.5□□□□□ -1.21
NIPBL-201ENST00000282516 USF3Q68DE3 2245 aa7.5□□□□□ -1.21
NIPBL-201ENST00000282516 HAX1O00165 279 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 RNASE4P34096 147 aaKnown RBP7.49□□□□□ -1.21
NIPBL-201ENST00000282516 LINC01465Q8N7H1 131 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 TMEM186Q96B77 213 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 PSME4Q14997 1843 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 HOXB3P14651 431 aaPredicted RBP7.49□□□□□ -1.21
NIPBL-201ENST00000282516 ZNF585BQ52M93 769 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 C16orf47Q6ZP98 133 aaPredicted RBP7.49□□□□□ -1.21
NIPBL-201ENST00000282516 LINC00305Q7Z4B0 112 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 CST9LQ9H4G1 147 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 VGLL1Q99990 258 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 STRCP1A6NGW2 1772 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 TRGV2A0A075B6R0 118 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 PRR33A8MZF0 331 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 NMBP08949 121 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 DTX1Q86Y01 620 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 RBM38Q9H0Z9 239 aaKnown RBP7.49□□□□□ -1.21
NIPBL-201ENST00000282516 ZNF257Q9Y2Q1 563 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 PTGDSP41222 190 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 SIGMAR1Q99720 223 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 CYSLTR1Q9Y271 337 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 SORL1Q92673 2214 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 MPTX1A8MV57 137 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 C1QL1O75973 258 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 PDLIM4P50479 330 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 KIAA1644Q3SXP7 199 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 ZNF784Q8NCA9 323 aaPredicted RBP7.49□□□□□ -1.21
NIPBL-201ENST00000282516 TCF19Q9Y242 345 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 PTPRFP10586 1907 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 MYO18BQ8IUG5 2567 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 UCP3P55916 312 aa7.49□□□□□ -1.21
NIPBL-201ENST00000282516 TRAV24A0A0B4J272 114 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 CXCL2P19875 107 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 TMPRSS3P57727 454 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 ZIC1Q15915 447 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 C2orf68Q2NKX9 166 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 ITLN2Q8WWU7 325 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-201ENST00000282516 MIXL1Q9H2W2 232 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 TRGV3P03979 118 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 UCP2P55851 309 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 AQP3Q92482 292 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 WNT10AQ9GZT5 417 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 LINC01565O15544 149 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 VSIG10L2P0DP72 767 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 CENPVQ7Z7K6 275 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-201ENST00000282516 SELENOHQ8IZQ5 122 aaKnown RBP7.48□□□□□ -1.21
NIPBL-201ENST00000282516 ITLN1Q8WWA0 313 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 LINC01587Q99440 93 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 MRPS18BQ9Y676 258 aaKnown RBP7.48□□□□□ -1.21
NIPBL-201ENST00000282516 LOC390937A0A1W2PQ73 354 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 NGFRP08138 427 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 RND3P61587 244 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 IRF3Q14653 427 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 C1QL3Q5VWW1 255 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 MORN3Q6PF18 240 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-201ENST00000282516 ZNF818PQ6ZRF7 136 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 ORAOV1Q8WV07 137 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 PAPPAQ13219 1627 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 ZNF729A6NN14 1252 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-201ENST00000282516 GATAD1Q8WUU5 269 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 GPR146Q96CH1 333 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 PPIAL4CA0A0B4J2A2 164 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 PQLC2LA1A4F0 135 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 PPIAL4GP0DN37 164 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms