RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 RNF114Q9Y508 228 aa22.71■■□□□ 1.23
CBX4-201ENST00000269397 SNURFLB1AK76 121 aa22.71■■□□□ 1.23
CBX4-201ENST00000269397 CGAP01215 116 aa22.71■■□□□ 1.23
CBX4-201ENST00000269397 ERVK-16P61578 105 aa22.71■■□□□ 1.23
CBX4-201ENST00000269397 SLC35B1P78383 322 aa22.71■■□□□ 1.23
CBX4-201ENST00000269397 MORN2Q502X0 79 aa22.71■■□□□ 1.23
CBX4-201ENST00000269397 C1orf229Q6ZS94 237 aaPredicted RBP22.71■■□□□ 1.23
CBX4-201ENST00000269397 TCF19Q9Y242 345 aa22.71■■□□□ 1.23
CBX4-201ENST00000269397 MYOD1P15172 320 aa22.7■■□□□ 1.22
CBX4-201ENST00000269397 FAM122AQ96E09 287 aa22.7■■□□□ 1.22
CBX4-201ENST00000269397 ADH4P08319 380 aa22.7■■□□□ 1.22
CBX4-201ENST00000269397 OR8I2Q8N0Y5 310 aa22.7■■□□□ 1.22
CBX4-201ENST00000269397 TMEM68Q96MH6 324 aa22.7■■□□□ 1.22
CBX4-201ENST00000269397 PRDX2P32119 198 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 NPVFQ9HCQ7 196 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 DUSP13Q9UII6 198 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 IGHV3OR15-7A0A075B7D8 119 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 TNFSF15O95150 251 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 MMD2Q8IY49 270 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 OR5AU1Q8NGC0 362 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 CDX2Q99626 313 aaPredicted RBP22.69■■□□□ 1.22
CBX4-201ENST00000269397 TXNDC17Q9BRA2 123 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 IER2Q9BTL4 223 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 LRFN3Q9BTN0 628 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 HINT2Q9BX68 163 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 LSM4Q9Y4Z0 139 aaKnown RBP22.69■■□□□ 1.22
CBX4-201ENST00000269397 ICE1Q9Y2F5 2266 aa22.69■■□□□ 1.22
CBX4-201ENST00000269397 AHRRA9YTQ3 701 aa22.68■■□□□ 1.22
CBX4-201ENST00000269397 LGALS4P56470 323 aa22.68■■□□□ 1.22
CBX4-201ENST00000269397 PAFAH1B2P68402 229 aa22.68■■□□□ 1.22
CBX4-201ENST00000269397 HTD2P86397 168 aa22.68■■□□□ 1.22
CBX4-201ENST00000269397 GMPPAQ96IJ6 420 aaPredicted RBP22.68■■□□□ 1.22
CBX4-201ENST00000269397 EAF1Q96JC9 268 aaPredicted RBP22.68■■□□□ 1.22
CBX4-201ENST00000269397 CADP27708 2225 aa22.68■■□□□ 1.22
CBX4-201ENST00000269397 KIAA1644Q3SXP7 199 aa22.68■■□□□ 1.22
CBX4-201ENST00000269397 AARDQ4LEZ3 155 aa22.68■■□□□ 1.22
CBX4-201ENST00000269397 TEX43Q6ZNM6 134 aa22.68■■□□□ 1.22
CBX4-201ENST00000269397 S1PR3Q99500 378 aa22.68■■□□□ 1.22
CBX4-201ENST00000269397 TNCP24821 2201 aa22.68■■□□□ 1.22
CBX4-201ENST00000269397 TNFSF13O75888 250 aa22.67■■□□□ 1.22
CBX4-201ENST00000269397 CD46P15529 392 aa22.67■■□□□ 1.22
CBX4-201ENST00000269397 ST6GALNAC3Q8NDV1 305 aa22.67■■□□□ 1.22
CBX4-201ENST00000269397 IGFBP2P18065 325 aa22.67■■□□□ 1.22
CBX4-201ENST00000269397 MIR17HGQ75NE6 70 aa22.67■■□□□ 1.22
CBX4-201ENST00000269397 TMEM208Q9BTX3 173 aa22.67■■□□□ 1.22
CBX4-201ENST00000269397 CFAP47Q6ZTR5 3102 aa22.67■■□□□ 1.22
CBX4-201ENST00000269397 TMPRSS3P57727 454 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 RHOBP62745 196 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 TEPPQ6URK8 271 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 DOLPP1Q86YN1 238 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 ZNRF1Q8ND25 227 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 TRIB1Q96RU8 372 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 MIEN1Q9BRT3 115 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 SVILO95425 2214 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 RPLP1P05386 114 aaKnown RBP22.66■■□□□ 1.22
CBX4-201ENST00000269397 FXYD3Q14802 87 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 RPEL1Q2QD12 228 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 ALKBH2Q6NS38 261 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 INO80CQ6PI98 192 aaPredicted RBP22.66■■□□□ 1.22
CBX4-201ENST00000269397 VAMP8Q9BV40 100 aa22.66■■□□□ 1.22
CBX4-201ENST00000269397 ZNF891A8MT65 544 aaPredicted RBP22.65■■□□□ 1.22
CBX4-201ENST00000269397 TCL1AP56279 114 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 RNASE7Q9H1E1 156 aaKnown RBP22.65■■□□□ 1.22
CBX4-201ENST00000269397 A8MXE2 369 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 KRTDAPP60985 99 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 V9GYV3 84 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 IGKV1D-17A0A075B6S4 117 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 CRYBB3P26998 211 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 TNFSF10P50591 281 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 RANP62826 216 aaKnown RBP22.65■■□□□ 1.22
CBX4-201ENST00000269397 MOB3BQ86TA1 216 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 FAM90A1Q86YD7 464 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 OR2Z1Q8NG97 314 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 UHRF2Q96PU4 802 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 IFI27L2Q9H2X8 130 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 GNB4Q9HAV0 340 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 FBXL7Q9UJT9 491 aa22.65■■□□□ 1.22
CBX4-201ENST00000269397 NPSP0C0P6 89 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 TMEM164Q5U3C3 297 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 OR52E5Q8NH55 327 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 FAM216AQ8WUB2 273 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 C20orf144Q9BQM9 153 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 C21orf140B9A014 251 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 CA2P00918 260 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 CECR9P0C854 216 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 NPY1RP25929 384 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 COMPP49747 757 aaPredicted RBP22.64■■□□□ 1.21
CBX4-201ENST00000269397 PSG5Q15238 335 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 TMEM183BQ1AE95 376 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 CENPWQ5EE01 88 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 ASPHD1Q5U4P2 390 aa22.64■■□□□ 1.21
CBX4-201ENST00000269397 GATA2P23769 480 aaPredicted RBP22.63■■□□□ 1.21
CBX4-201ENST00000269397 HOXC12P31275 282 aa22.63■■□□□ 1.21
CBX4-201ENST00000269397 VWA1Q6PCB0 445 aa22.63■■□□□ 1.21
CBX4-201ENST00000269397 PQLC2Q6ZP29 291 aa22.63■■□□□ 1.21
CBX4-201ENST00000269397 SLC24A4Q8NFF2 622 aa22.63■■□□□ 1.21
CBX4-201ENST00000269397 NAT8BQ9UHF3 227 aa22.63■■□□□ 1.21
CBX4-201ENST00000269397 UBALD2Q8IYN6 164 aa22.63■■□□□ 1.21
CBX4-201ENST00000269397 OPN3Q9H1Y3 402 aaPredicted RBP22.63■■□□□ 1.21
CBX4-201ENST00000269397 LOXL3P58215 753 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms