RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TSNAXQ99598 290 aaKnown RBP13.18□□□□□ -0.3
TPM1-201ENST00000267996 HIPK2Q9H2X6 1198 aa13.18□□□□□ -0.3
TPM1-201ENST00000267996 CRYGBP07316 175 aa13.17□□□□□ -0.3
TPM1-201ENST00000267996 MYOD1P15172 320 aa13.17□□□□□ -0.3
TPM1-201ENST00000267996 CD1BP29016 333 aa13.17□□□□□ -0.3
TPM1-201ENST00000267996 UBE2E1P51965 193 aa13.17□□□□□ -0.3
TPM1-201ENST00000267996 RPL8P62917 257 aaKnown RBP13.17□□□□□ -0.3
TPM1-201ENST00000267996 MRGPRG-AS1Q2M3A8 158 aa13.17□□□□□ -0.3
TPM1-201ENST00000267996 VMA21Q3ZAQ7 101 aa13.17□□□□□ -0.3
TPM1-201ENST00000267996 TEX45Q8NA69 505 aa13.17□□□□□ -0.3
TPM1-201ENST00000267996 CXorf58Q96LI9 332 aa13.17□□□□□ -0.3
TPM1-201ENST00000267996 PSMG3-AS1Q96PY0 264 aa13.17□□□□□ -0.3
TPM1-201ENST00000267996 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
TPM1-201ENST00000267996 HEYLQ9NQ87 328 aaPredicted RBP13.17□□□□□ -0.3
TPM1-201ENST00000267996 TIMM23O14925 209 aa13.16□□□□□ -0.3
TPM1-201ENST00000267996 SLC25A16P16260 332 aa13.16□□□□□ -0.3
TPM1-201ENST00000267996 HOXA1P49639 335 aaPredicted RBP13.16□□□□□ -0.3
TPM1-201ENST00000267996 RPP30P78346 268 aaKnown RBP13.16□□□□□ -0.3
TPM1-201ENST00000267996 SLC38A11Q08AI6 406 aa13.16□□□□□ -0.3
TPM1-201ENST00000267996 ATP6V1FQ16864 119 aa13.16□□□□□ -0.3
TPM1-201ENST00000267996 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
TPM1-201ENST00000267996 BEX4Q9NWD9 120 aaPredicted RBP13.16□□□□□ -0.3
TPM1-201ENST00000267996 TBL2Q9Y4P3 447 aaKnown RBP13.16□□□□□ -0.3
TPM1-201ENST00000267996 INS-IGF2F8WCM5 200 aa13.15□□□□□ -0.3
TPM1-201ENST00000267996 ATP6V0CP27449 155 aa13.15□□□□□ -0.3
TPM1-201ENST00000267996 CLEC12BQ2HXU8 276 aa13.15□□□□□ -0.3
TPM1-201ENST00000267996 OR10P1Q8NGE3 313 aa13.15□□□□□ -0.3
TPM1-201ENST00000267996 OR1L8Q8NGR8 309 aa13.15□□□□□ -0.3
TPM1-201ENST00000267996 TMEM170AQ8WVE7 144 aa13.15□□□□□ -0.3
TPM1-201ENST00000267996 PINX1Q96BK5 328 aaKnown RBP13.15□□□□□ -0.3
TPM1-201ENST00000267996 GNPNAT1Q96EK6 184 aaPredicted RBP13.15□□□□□ -0.3
TPM1-201ENST00000267996 SAT2Q96F10 170 aaPredicted RBP13.15□□□□□ -0.3
TPM1-201ENST00000267996 SH3BGRL3Q9H299 93 aa13.15□□□□□ -0.3
TPM1-201ENST00000267996 ZNF430Q9H8G1 570 aaPredicted RBP13.15□□□□□ -0.3
TPM1-201ENST00000267996 NDUFA4L2Q9NRX3 87 aa13.15□□□□□ -0.3
TPM1-201ENST00000267996 TENM4Q6N022 2769 aa13.15□□□□□ -0.3
TPM1-201ENST00000267996 SLC25A17O43808 307 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 VENTXO95231 258 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 IFNA5P01569 189 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 OR8U8P0C7N1 319 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 PSG5Q15238 335 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 VWC2Q2TAL6 325 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 OR8G2PQ6IF36 304 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 CCDC144NLQ6NUI1 221 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 COMMD7Q86VX2 200 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 C1orf159Q96HA4 380 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 PLEKHA3Q9HB20 300 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 LPAR2Q9HBW0 351 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 HILPDAQ9Y5L2 63 aa13.15□□□□□ -0.31
TPM1-201ENST00000267996 DOPEY2Q9Y3R5 2298 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 A0A096LNT2 108 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 A0A1W2PRD5 423 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 A0A1W2PRF3 423 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 A0A1W2PRM7 423 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 IFNA10P01566 189 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 S100A1P23297 94 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 LRRC75BQ2VPJ9 315 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 LILRB2Q8N423 598 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 AJUBAQ96IF1 538 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 TMEM147Q9BVK8 224 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 COMMD5Q9GZQ3 224 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 ENY2Q9NPA8 101 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 TPSG1Q9NRR2 321 aa13.14□□□□□ -0.31
TPM1-201ENST00000267996 ANKRD17O75179 2603 aaKnown RBP13.13□□□□□ -0.31
TPM1-201ENST00000267996 PRSS46E5RG02 174 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 RRHO14718 337 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 CNTFRP26992 372 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 RAB5CP51148 216 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
TPM1-201ENST00000267996 LGALS4P56470 323 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 PRSS8Q16651 343 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 LRRC75A-AS1Q8N1F1 130 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 DYNAPQ8N1N2 210 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 REG4Q9BYZ8 158 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 SIGLEC9Q9Y336 463 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 CELSR2Q9HCU4 2923 aa13.13□□□□□ -0.31
TPM1-201ENST00000267996 CENPEQ02224 2701 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 CGB1A6NKQ9 187 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 ZNF705EA8MWA4 302 aaPredicted RBP13.12□□□□□ -0.31
TPM1-201ENST00000267996 SSX2Q16385 188 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 DEFB113Q30KQ7 82 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 MMD2Q8IY49 270 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 MALSU1Q96EH3 234 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 GGACTQ9BVM4 153 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 HINT2Q9BX68 163 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 WDR61Q9GZS3 305 aaKnown RBP13.12□□□□□ -0.31
TPM1-201ENST00000267996 POLQO75417 2590 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 HELZ2Q9BYK8 2649 aaKnown RBP13.12□□□□□ -0.31
TPM1-201ENST00000267996 E7EUB6 86 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 OPN1MWP04001 364 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 MSMBP08118 114 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 OPN1MW2P0DN77 364 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 OPN1MW3P0DN78 364 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 MDKP21741 143 aaPredicted RBP13.12□□□□□ -0.31
TPM1-201ENST00000267996 NPY1RP25929 384 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 MAS1LP35410 378 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 RAB11AP62491 216 aa13.12□□□□□ -0.31
TPM1-201ENST00000267996 RUNX1Q01196 453 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms