RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ZNF658BQ4V348 819 aaPredicted RBP10.22□□□□□ -0.77
SMG6-201ENST00000263073 TRAV24A0A0B4J272 114 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 NDUFS6O75380 124 aaKnown RBP10.22□□□□□ -0.77
SMG6-201ENST00000263073 SELENOTP62341 195 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 TMEM95Q3KNT9 176 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 PRELID3AQ96N28 172 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 VSIRQ9H7M9 311 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 IGKV3D-20A0A0C4DH25 116 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 ZNF729A6NN14 1252 aaPredicted RBP10.22□□□□□ -0.77
SMG6-201ENST00000263073 LY6G6FQ5SQ64 297 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 C1orf185Q5T7R7 199 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 WFDC1Q9HC57 220 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 C21orf140B9A014 251 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 WDR82Q6UXN9 313 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 CYP2G1PQ6ZSU1 146 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 DEPPQ9NTK1 212 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 CLDN16Q9Y5I7 305 aa10.22□□□□□ -0.77
SMG6-201ENST00000263073 HIST1H2BKO60814 126 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 HIST1H2BJP06899 126 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 HIST1H2BOP23527 126 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 HIST1H2BBP33778 126 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 HIST1H2BDP58876 126 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 HIST1H2BCP62807 126 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 HIST2H2BEQ16778 126 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.21□□□□□ -0.77
SMG6-201ENST00000263073 TCF24Q7RTU0 167 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 HIST1H2BHQ93079 126 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 CTHRC1Q96CG8 243 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 HIST1H2BNQ99877 126 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 HIST1H2BMQ99879 126 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 TDRD6O60522 2096 aaKnown RBP10.21□□□□□ -0.77
SMG6-201ENST00000263073 TGFBR3LH3BV60 316 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 SMIM10L1P0DMW3 83 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 SMIM10Q96HG1 83 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 NRN1Q9NPD7 142 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 PLSCR2Q9NRY7 297 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 LRRC37AA6NMS7 1700 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 PRR32B1ATL7 298 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 FAM90A26D6RGX4 464 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 H0YIZ8 118 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 TBR1Q16650 682 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 SYT8Q8NBV8 401 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 OR5P3Q8WZ94 311 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 TXNDC17Q9BRA2 123 aa10.21□□□□□ -0.77
SMG6-201ENST00000263073 TRBV9A0A0B4J1U6 114 aa10.21□□□□□ -0.78
SMG6-201ENST00000263073 CXCL1P09341 107 aa10.21□□□□□ -0.78
SMG6-201ENST00000263073 LINC00614P0C842 121 aa10.21□□□□□ -0.78
SMG6-201ENST00000263073 MFAP4P55083 255 aa10.21□□□□□ -0.78
SMG6-201ENST00000263073 HS3ST3B1Q9Y662 390 aa10.21□□□□□ -0.78
SMG6-201ENST00000263073 TPRP12270 2363 aaKnown RBP10.21□□□□□ -0.78
SMG6-201ENST00000263073 PNKDQ8N490 385 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 KIR3DL3Q8N743 410 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 DUSP15Q9H1R2 295 aaPredicted RBP10.2□□□□□ -0.78
SMG6-201ENST00000263073 LAMTOR2Q9Y2Q5 125 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 AICDAQ9GZX7 198 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 SNRNP200O75643 2136 aaKnown RBP10.2□□□□□ -0.78
SMG6-201ENST00000263073 TDRD15B5MCY1 1934 aaKnown RBP10.2□□□□□ -0.78
SMG6-201ENST00000263073 C12orf77C9JDV5 145 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 MC5RP33032 325 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 PSG9Q00887 426 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 C10orf126Q8N4M7 172 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 TMEM54Q969K7 222 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 MRAP2Q96G30 205 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 FOXA2Q9Y261 457 aaPredicted RBP10.2□□□□□ -0.78
SMG6-201ENST00000263073 RGPD4Q7Z3J3 1758 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 LIPFP07098 398 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 COX6A1P12074 109 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 JOSD1Q15040 202 aaPredicted RBP10.2□□□□□ -0.78
SMG6-201ENST00000263073 RRN3P1Q2M238 152 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 PKIBQ9C010 78 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 LSM4Q9Y4Z0 139 aaKnown RBP10.2□□□□□ -0.78
SMG6-201ENST00000263073 TRAV12-3A0A0B4J271 114 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 PPIAL4CA0A0B4J2A2 164 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 FAM106CPP0CH98 169 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 PPIAL4GP0DN37 164 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 PSMG3Q9BT73 122 aaPredicted RBP10.2□□□□□ -0.78
SMG6-201ENST00000263073 CHODLQ9H9P2 273 aa10.2□□□□□ -0.78
SMG6-201ENST00000263073 IGKV1D-13A0A0B4J2D9 117 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 HIGD1CA8MV81 97 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 IGKV1-13P0DP09 117 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 ZNF146Q15072 292 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 OR13A1Q8NGR1 328 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 A0A0G2JMM0 328 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 A0A1W2PPB8 328 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 A0A1W2PRS3 328 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 KIR3DP1A8MWS1 328 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 OR11H12B2RN74 326 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 IGHMP01871 453 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 SAMD13Q5VXD3 122 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 CCDC144NLQ6NUI1 221 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 C19orf48Q6RUI8 117 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 OR11H1Q8NG94 326 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 OR11H2Q8NH07 326 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A10PA6NDY2 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A18PA6NE21 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A16PA6NEW6 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A20PA6NIJ5 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A8PA6NJQ4 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A7PA6NKC0 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A22PA8MWA6 464 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms