RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 SHPKQ9UHJ6 478 aa13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 NSG2Q9Y328 171 aa13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 E7EUB6 86 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 INMT-MINDY4F8WBC2 141 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 SNAPC5O75971 98 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 SPNP16150 400 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 VDAC1P21796 283 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 IZUMO4Q1ZYL8 232 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 C10orf55Q5SWW7 151 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 OR52B4Q8NGK2 314 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 GRPEL2Q8TAA5 225 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 WIPF2Q8TF74 440 aaPredicted RBP13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 TENM1Q9UKZ4 2725 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 A0A0B4J293 547 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 DUXBA0A1W2PPF3 345 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 C15orf61A6NNL5 157 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 G3V318 75 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 HAX1O00165 279 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 IL5P05113 134 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 MYOD1P15172 320 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 Q6ZRM9 215 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 KLHDC1Q8N7A1 406 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 LFNGQ8NES3 379 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 RNASE11Q8TAA1 199 aaKnown RBP13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 ABHD5Q8WTS1 349 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 MITD1Q8WV92 249 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 GPR146Q96CH1 333 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 COMMD5Q9GZQ3 224 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 TMEM14BQ9NUH8 114 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 PRNDQ9UKY0 176 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 WSB1Q9Y6I7 421 aa13.07□□□□□ -0.32
CHCHD3-201ENST00000262570 TRAV41A0A0B4J266 112 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 MSGN1A6NI15 193 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 DBX1A6NMT0 343 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 PPIFP30405 207 aaKnown RBP13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 RPL27AP46776 148 aaKnown RBP13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 OR2B8PP59922 312 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 CFHR3Q02985 330 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 TMEM267Q0VDI3 215 aaPredicted RBP13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 RGS21Q2M5E4 152 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 AKIRIN2Q53H80 203 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 C19orf54Q5BKX5 351 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 NMSQ5H8A3 153 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 CENPVQ7Z7K6 275 aaPredicted RBP13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 OR4A16Q8NH70 328 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 COQ8AQ8NI60 647 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 SEC22CQ9BRL7 303 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 GON7Q9BXV9 100 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 FKBP11Q9NYL4 201 aa13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 FOXA2Q9Y261 457 aaPredicted RBP13.06□□□□□ -0.32
CHCHD3-201ENST00000262570 TEX50A0A1B0GTY4 177 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 A0A1B0GW64 132 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 OPN1MWP04001 364 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 OPN1MW2P0DN77 364 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 OPN1MW3P0DN78 364 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 C10orf99Q6UWK7 81 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 ZNF329Q86UD4 541 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 ZNF429Q86V71 674 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 MINDY2Q8NBR6 621 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 ZNF431Q8TF32 576 aaPredicted RBP13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 WFDC12Q8WWY7 111 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 TMEM68Q96MH6 324 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 SPIN2AQ99865 258 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 SPIN2BQ9BPZ2 258 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 TMED3Q9Y3Q3 217 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 OR51B2Q9Y5P1 312 aa13.05□□□□□ -0.32
CHCHD3-201ENST00000262570 PSMB11A5LHX3 300 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 CGB1A6NKQ9 187 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 TEX22C9J3V5 150 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 PRAF2O60831 178 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 ECSCRQ19T08 205 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 ASPHD1Q5U4P2 390 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 UNQ5815/PRO19632Q6UWF5 114 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 OR5AU1Q8NGC0 362 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 OR5B3Q8NH48 314 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 PHB2Q99623 299 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 NDUFA4L2Q9NRX3 87 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 ZNF257Q9Y2Q1 563 aa13.04□□□□□ -0.32
CHCHD3-201ENST00000262570 RBMXL2O75526 392 aaKnown RBP13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 DHFRP00374 187 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 HOXB5P09067 269 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 KRTAP10-3P60369 221 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 SLC35B1P78383 322 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 AARDQ4LEZ3 155 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 OR1L8Q8NGR8 309 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 FYTTD1Q96QD9 318 aaKnown RBP13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 QTRT1Q9BXR0 403 aaKnown RBP13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 COA4Q9NYJ1 87 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 CACNG5Q9UF02 275 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 STAB1Q9NY15 2570 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 HMX3A6NHT5 357 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 ADAP1O75689 374 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 APELAP0DMC3 54 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 HSPE1P61604 102 aaKnown RBP13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 GGNBP1Q5YKI7 109 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 C12orf54Q6X4T0 127 aa13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 GPN1Q9HCN4 374 aaPredicted RBP13.03□□□□□ -0.32
CHCHD3-201ENST00000262570 A0A1B0GU03 582 aa13.02□□□□□ -0.33
CHCHD3-201ENST00000262570 A0A1W2PN81 502 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms