RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 IL6RP08887 468 aaPredicted RBP11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 H1FOOQ8IZA3 346 aaPredicted RBP11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 TEX45Q8NA69 505 aa11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 ZNF502Q8TBZ5 544 aa11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 SCN3AQ9NY46 2000 aa11.41□□□□□ -0.58
PDGFRB-201ENST00000261799 ATP6V0CP27449 155 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 MEIG1Q5JSS6 88 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 CFAP161Q6P656 301 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 GLRX5Q86SX6 157 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 HINT1P49773 126 aaPredicted RBP11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 ERVK11-1P61568 191 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 FLVCR1-AS1Q8TAF5 88 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 ARID2Q68CP9 1835 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 MSGN1A6NI15 193 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 CD81P60033 236 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 ZNF646O15015 1829 aaPredicted RBP11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 GCGP01275 180 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 SEC11BP0C7V7 166 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 UCP3P55916 312 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 IQCJQ1A5X6 159 aa11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 IBA57Q5T440 356 aaKnown RBP11.4□□□□□ -0.58
PDGFRB-201ENST00000261799 M0R1W7 72 aa11.4□□□□□ -0.59
PDGFRB-201ENST00000261799 CD5P06127 495 aa11.4□□□□□ -0.59
PDGFRB-201ENST00000261799 SRSF7Q16629 238 aaKnown RBP eCLIP11.4□□□□□ -0.59
PDGFRB-201ENST00000261799 WDR82Q6UXN9 313 aa11.4□□□□□ -0.59
PDGFRB-201ENST00000261799 SMIM8Q96KF7 97 aa11.4□□□□□ -0.59
PDGFRB-201ENST00000261799 OTOFQ9HC10 1997 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 PQLC2LA1A4F0 135 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 C1QCP02747 245 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 MALP21145 153 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 IER3P46695 156 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 VAMP3Q15836 100 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 C2orf83Q53S99 150 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 C17orf82Q86X59 251 aaPredicted RBP11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 ZCCHC24Q8N2G6 241 aaKnown RBP11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 RAB37Q96AX2 223 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 HLA-DRB1P01911 266 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 SULT1A2P50226 295 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 RHOGP84095 191 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 RNASEH2CQ8TDP1 164 aaKnown RBP11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 MARVELD1Q9BSK0 173 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 OOSP1A8MZH6 123 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 CRYGSP22914 178 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 CD74P04233 296 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 LGALS3P17931 250 aaKnown RBP11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 MFAP2P55001 183 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 TMEM183BQ1AE95 376 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 PLA2G2CQ5R387 149 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 ZFP30Q9Y2G7 519 aa11.39□□□□□ -0.59
PDGFRB-201ENST00000261799 FAM74A7A6NL05 159 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 C2orf88Q9BSF0 95 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 A0A0G2JK05 382 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 TAF15Q92804 592 aaKnown RBP eCLIP11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 GREB1LQ9C091 1923 aaPredicted RBP11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 THSD7BQ9C0I4 1608 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 PRB3Q04118 309 aaPredicted RBP11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 ZNF585BQ52M93 769 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 NABP2Q9BQ15 211 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 SLC25A15Q9Y619 301 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 TRGV4A0A0C4DH28 118 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 NPIPB9F8W1W9 429 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 GGCTO75223 188 aaKnown RBP11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 SUMO2P61956 95 aaKnown RBP11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 GOLT1AQ6ZVE7 132 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 PGLYRP4Q96LB8 373 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 SIPA1L1O43166 1804 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 SAA2-SAA4A0A096LPE2 208 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 H3BTX0 84 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 TIMM23O14925 209 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 OR9G9P0C7N8 305 aa11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 SAA2P0DJI9 122 aaPredicted RBP11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 SRSF12Q8WXF0 261 aaKnown RBP11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 MCRIP2Q9BUT9 160 aaKnown RBP11.38□□□□□ -0.59
PDGFRB-201ENST00000261799 PSCAO43653 123 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 MST1P26927 711 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 GPR132Q9UNW8 380 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 TBL2Q9Y4P3 447 aaKnown RBP11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 V9GYH0 126 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 SBF1O95248 1867 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 SIGLEC5O15389 551 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 IGHV3-48P01763 117 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 CLLU1Q5K131 121 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 ZNF383Q8NA42 475 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 YPEL1O60688 119 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 PTBP3O95758 552 aaKnown RBP11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 IGHG3P01860 377 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 TDGF1P13385 188 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 KLHL30-AS1Q8NEE0 82 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 YPEL2Q96QA6 119 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 DMRTA2Q96SC8 542 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 TMEM178BH3BS89 294 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 H3BUX3 64 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 TCF21O43680 179 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 TMEM252Q8N6L7 170 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 KCNS1Q96KK3 526 aa11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 BEX4Q9NWD9 120 aaPredicted RBP11.37□□□□□ -0.59
PDGFRB-201ENST00000261799 WISP1O95388 367 aa11.36□□□□□ -0.59
PDGFRB-201ENST00000261799 LINC01590Q5TEZ4 76 aa11.36□□□□□ -0.59
PDGFRB-201ENST00000261799 TEX38Q6PEX7 206 aa11.36□□□□□ -0.59
PDGFRB-201ENST00000261799 SLC50A1Q9BRV3 221 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms