RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 FKBP11Q9NYL4 201 aa22.45■■□□□ 1.19
CCM2-201ENST00000258781 WASHC3Q9Y3C0 194 aa22.45■■□□□ 1.19
CCM2-201ENST00000258781 GCN1Q92616 2671 aaKnown RBP22.45■■□□□ 1.18
CCM2-201ENST00000258781 F12P00748 615 aaPredicted RBP22.45■■□□□ 1.18
CCM2-201ENST00000258781 SAA1P0DJI8 122 aaPredicted RBP22.45■■□□□ 1.18
CCM2-201ENST00000258781 DIAPH2-AS1Q14236 149 aa22.45■■□□□ 1.18
CCM2-201ENST00000258781 BEND2Q8NDZ0 799 aa22.45■■□□□ 1.18
CCM2-201ENST00000258781 OR4C13Q8NGP0 309 aa22.45■■□□□ 1.18
CCM2-201ENST00000258781 KBTBD11O94819 623 aa22.44■■□□□ 1.18
CCM2-201ENST00000258781 H2AFB1P0C5Y9 115 aa22.44■■□□□ 1.18
CCM2-201ENST00000258781 MC5RP33032 325 aa22.44■■□□□ 1.18
CCM2-201ENST00000258781 HLA-DRB5Q30154 266 aa22.44■■□□□ 1.18
CCM2-201ENST00000258781 ENY2Q9NPA8 101 aa22.44■■□□□ 1.18
CCM2-201ENST00000258781 SCRT1Q9BWW7 348 aa22.43■■□□□ 1.18
CCM2-201ENST00000258781 CARHSP1Q9Y2V2 147 aaKnown RBP22.43■■□□□ 1.18
CCM2-201ENST00000258781 A0A1B0GW64 132 aa22.43■■□□□ 1.18
CCM2-201ENST00000258781 C22orf46C9J442 243 aa22.43■■□□□ 1.18
CCM2-201ENST00000258781 ADCYAP1P18509 176 aa22.43■■□□□ 1.18
CCM2-201ENST00000258781 PTPN13Q12923 2485 aa22.43■■□□□ 1.18
CCM2-201ENST00000258781 SPSB3Q6PJ21 355 aa22.43■■□□□ 1.18
CCM2-201ENST00000258781 GGACTQ9BVM4 153 aa22.43■■□□□ 1.18
CCM2-201ENST00000258781 SEC11CQ9BY50 192 aa22.43■■□□□ 1.18
CCM2-201ENST00000258781 MDKP21741 143 aaPredicted RBP22.42■■□□□ 1.18
CCM2-201ENST00000258781 GPR6P46095 362 aaPredicted RBP22.42■■□□□ 1.18
CCM2-201ENST00000258781 EFNA4P52798 201 aa22.42■■□□□ 1.18
CCM2-201ENST00000258781 RPS16P62249 146 aaKnown RBP22.42■■□□□ 1.18
CCM2-201ENST00000258781 RAB11AP62491 216 aa22.42■■□□□ 1.18
CCM2-201ENST00000258781 PRCDQ00LT1 54 aa22.42■■□□□ 1.18
CCM2-201ENST00000258781 PEA15Q15121 130 aa22.42■■□□□ 1.18
CCM2-201ENST00000258781 GUK1Q16774 197 aa22.42■■□□□ 1.18
CCM2-201ENST00000258781 OR4A5Q8NH83 315 aa22.42■■□□□ 1.18
CCM2-201ENST00000258781 CCL19Q99731 98 aa22.42■■□□□ 1.18
CCM2-201ENST00000258781 PBDC1Q9BVG4 233 aa22.42■■□□□ 1.18
CCM2-201ENST00000258781 SSBP3Q9BWW4 388 aaPredicted RBP22.42■■□□□ 1.18
CCM2-201ENST00000258781 F8W036 122 aa22.41■■□□□ 1.18
CCM2-201ENST00000258781 HBE1P02100 147 aa22.41■■□□□ 1.18
CCM2-201ENST00000258781 ETV3LQ6ZN32 361 aa22.41■■□□□ 1.18
CCM2-201ENST00000258781 OR5B3Q8NH48 314 aa22.41■■□□□ 1.18
CCM2-201ENST00000258781 VSTM2AQ8TAG5 236 aa22.41■■□□□ 1.18
CCM2-201ENST00000258781 RBMXL1Q96E39 390 aaKnown RBP22.41■■□□□ 1.18
CCM2-201ENST00000258781 AMMECR1Q9Y4X0 333 aaPredicted RBP22.41■■□□□ 1.18
CCM2-201ENST00000258781 FGF7P21781 194 aa22.41■■□□□ 1.18
CCM2-201ENST00000258781 NRGNQ92686 78 aa22.41■■□□□ 1.18
CCM2-201ENST00000258781 RPRMQ9NS64 109 aa22.41■■□□□ 1.18
CCM2-201ENST00000258781 ONECUT1Q9UBC0 465 aa22.41■■□□□ 1.18
CCM2-201ENST00000258781 TRAV1-1A0A0B4J248 108 aa22.4■■□□□ 1.18
CCM2-201ENST00000258781 FAM157AC9JC47 383 aa22.4■■□□□ 1.18
CCM2-201ENST00000258781 PRSS46E5RG02 174 aa22.4■■□□□ 1.18
CCM2-201ENST00000258781 RRHO14718 337 aa22.4■■□□□ 1.18
CCM2-201ENST00000258781 RAB2AP61019 212 aa22.4■■□□□ 1.18
CCM2-201ENST00000258781 DEFA5Q01523 94 aa22.4■■□□□ 1.18
CCM2-201ENST00000258781 TMEM41BQ5BJD5 291 aa22.4■■□□□ 1.18
CCM2-201ENST00000258781 MS4A7Q9GZW8 240 aaPredicted RBP22.4■■□□□ 1.18
CCM2-201ENST00000258781 USF1P22415 310 aaPredicted RBP22.39■■□□□ 1.18
CCM2-201ENST00000258781 SLC24A4Q8NFF2 622 aa22.39■■□□□ 1.18
CCM2-201ENST00000258781 TMEM167AQ8TBQ9 72 aa22.39■■□□□ 1.18
CCM2-201ENST00000258781 TMEM170AQ8WVE7 144 aa22.39■■□□□ 1.18
CCM2-201ENST00000258781 PLEKHA3Q9HB20 300 aa22.39■■□□□ 1.18
CCM2-201ENST00000258781 LOC105371242A0A075B767 164 aa22.39■■□□□ 1.17
CCM2-201ENST00000258781 BUB1B-PAK6H3BSN5 160 aa22.39■■□□□ 1.17
CCM2-201ENST00000258781 M0R1W7 72 aa22.39■■□□□ 1.17
CCM2-201ENST00000258781 DLK1P80370 383 aa22.39■■□□□ 1.17
CCM2-201ENST00000258781 KIAA1456Q9P272 454 aa22.39■■□□□ 1.17
CCM2-201ENST00000258781 TEX50A0A1B0GTY4 177 aa22.38■■□□□ 1.17
CCM2-201ENST00000258781 SFTA3P0C7M3 94 aa22.38■■□□□ 1.17
CCM2-201ENST00000258781 NPY1RP25929 384 aa22.38■■□□□ 1.17
CCM2-201ENST00000258781 SVBPQ8N300 66 aa22.38■■□□□ 1.17
CCM2-201ENST00000258781 SFT2D1Q8WV19 159 aa22.38■■□□□ 1.17
CCM2-201ENST00000258781 WDR83OSQ9Y284 106 aa22.38■■□□□ 1.17
CCM2-201ENST00000258781 ABCA12Q86UK0 2595 aa22.38■■□□□ 1.17
CCM2-201ENST00000258781 C9JQL5 133 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 MYOD1P15172 320 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 CD1BP29016 333 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 Q8N7P7 452 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 NPCDR1Q9BY65 106 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 EIF5A2Q9GZV4 153 aaKnown RBP22.37■■□□□ 1.17
CCM2-201ENST00000258781 SMDT1Q9H4I9 107 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 VSIRQ9H7M9 311 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 POLQO75417 2590 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 IGLV2-23P01705 113 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 IGHV4-39P01824 125 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 M6PRP20645 277 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 COX7A1P24310 79 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 DLX1P56177 255 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 ATP5IP56385 69 aaPredicted RBP22.37■■□□□ 1.17
CCM2-201ENST00000258781 RPL8P62917 257 aaKnown RBP22.37■■□□□ 1.17
CCM2-201ENST00000258781 OR4P4Q8NGL7 312 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 MBD3L1Q8WWY6 194 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 HINT2Q9BX68 163 aa22.37■■□□□ 1.17
CCM2-201ENST00000258781 TNCP24821 2201 aa22.36■■□□□ 1.17
CCM2-201ENST00000258781 A0A1B0GV50 99 aa22.36■■□□□ 1.17
CCM2-201ENST00000258781 C17orf112F2Z3M2 114 aa22.36■■□□□ 1.17
CCM2-201ENST00000258781 LGALS7P47929 136 aa22.36■■□□□ 1.17
CCM2-201ENST00000258781 CCL20P78556 96 aa22.36■■□□□ 1.17
CCM2-201ENST00000258781 ZNF709Q8N972 641 aa22.36■■□□□ 1.17
CCM2-201ENST00000258781 PSMG3-AS1Q96PY0 264 aa22.36■■□□□ 1.17
CCM2-201ENST00000258781 MPDU1O75352 247 aa22.35■■□□□ 1.17
CCM2-201ENST00000258781 MBP02144 154 aa22.35■■□□□ 1.17
CCM2-201ENST00000258781 IFNA4P05014 189 aa22.35■■□□□ 1.17
CCM2-201ENST00000258781 VMA21Q3ZAQ7 101 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms