RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 SF3B6Q9Y3B4 125 aaKnown RBP4.11□□□□□ -1.75
RC3H1-201ENST00000258349 SPG11Q96JI7 2443 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 C1QL1O75973 258 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 GPX1P07203 203 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 MPV17P39210 176 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 PCP4P48539 62 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 PSG4Q00888 419 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 SNAI3Q3KNW1 292 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 MBNL2Q5VZF2 373 aaKnown RBP4.11□□□□□ -1.75
RC3H1-201ENST00000258349 IGHV3-21A0A0B4J1V1 117 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 SAPCD1Q5SSQ6 148 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 APCDD1LQ8NCL9 501 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 TMEM101Q96IK0 257 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 CALYQ9NYX4 217 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 IL36BQ9NZH7 164 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 SORL1Q92673 2214 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 UPK3AO75631 287 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 ASPHD2Q6ICH7 369 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 ZAR1Q86SH2 424 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 ATRXP46100 2492 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 C9orf172C9J069 976 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 FXYD3Q14802 87 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 ZNF56Q15929 161 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 DCAF10Q5QP82 559 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 RAX2Q96IS3 184 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 G6PC2Q9NQR9 355 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 PPIAL4EA0A075B759 164 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 AHRRA9YTQ3 701 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 PPIAL4DF5H284 164 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 TM4SF5O14894 197 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 ITGBL1O95965 494 aaPredicted RBP4.11□□□□□ -1.75
RC3H1-201ENST00000258349 PPIAL4FP0DN26 164 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 COX5BP10606 129 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 ZNF818PQ6ZRF7 136 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 FAM169BQ8N8A8 192 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 RCC1LQ96I51 464 aaKnown RBP4.11□□□□□ -1.75
RC3H1-201ENST00000258349 CLEC7AQ9BXN2 247 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 DTX4Q9Y2E6 619 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 PPIAL4AQ9Y536 164 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 GRIFINA4D1Z8 144 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 SPINT1O43278 529 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 PRSS2P07478 247 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 FAM106AQ4KMX7 169 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 OR5A1Q8NGJ0 315 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 RPP21Q9H633 154 aaKnown RBP4.11□□□□□ -1.75
RC3H1-201ENST00000258349 J3QW42 95 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 FCGR2BP31994 310 aaPredicted RBP4.11□□□□□ -1.75
RC3H1-201ENST00000258349 GCSAMLQ5JQS6 135 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 CXorf66Q5JRM2 361 aaPredicted RBP4.11□□□□□ -1.75
RC3H1-201ENST00000258349 CLEC2AQ6UVW9 174 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 LINC00305Q7Z4B0 112 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 BIVMQ86UB2 503 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 CLDND2Q8NHS1 167 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 SDHCQ99643 169 aaPredicted RBP4.11□□□□□ -1.75
RC3H1-201ENST00000258349 CHODLQ9H9P2 273 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 SDF2L1Q9HCN8 221 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 IGLV1-36A0A0B4J1U3 117 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 PAX1P15863 534 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 PRSS12P56730 875 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 DMRTA1Q5VZB9 504 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 ZNF488Q96MN9 340 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 JPT1Q9UK76 154 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 OTOGLQ3ZCN5 2332 aa4.11□□□□□ -1.75
RC3H1-201ENST00000258349 RAI1Q7Z5J4 1906 aaPredicted RBP4.11□□□□□ -1.75
RC3H1-201ENST00000258349 A0A1B0GUT8 65 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 LOC105371267A0A1B0GV96 52 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 OR11H12B2RN74 326 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 HSPE1P61604 102 aaKnown RBP4.1□□□□□ -1.75
RC3H1-201ENST00000258349 C2orf68Q2NKX9 166 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 FHL5Q5TD97 284 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 HCP5Q6MZN7 132 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 DEFB124Q8NES8 71 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 OR11H1Q8NG94 326 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 OR11H2Q8NH07 326 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 SRSF12Q8WXF0 261 aaKnown RBP4.1□□□□□ -1.75
RC3H1-201ENST00000258349 IZUMO1RA6ND01 250 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 ZNF708P17019 499 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 OTX1P32242 354 aaPredicted RBP4.1□□□□□ -1.75
RC3H1-201ENST00000258349 C3AR1Q16581 482 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 TBR1Q16650 682 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 ATOH7Q8N100 152 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 WNT2BQ93097 391 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 TM2D1Q9BX74 207 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 ZNF729A6NN14 1252 aaPredicted RBP4.1□□□□□ -1.75
RC3H1-201ENST00000258349 RRHO14718 337 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 SLC25A53Q5H9E4 307 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 OR5P3Q8WZ94 311 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 DDB2Q92466 427 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 TMEM160Q9NX00 188 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 PEX7O00628 323 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 TYMSP04818 313 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 GOLT1AQ6ZVE7 132 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 MBD3L1Q8WWY6 194 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 TMEM54Q969K7 222 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 C11orf68Q9H3H3 251 aaKnown RBP4.1□□□□□ -1.75
RC3H1-201ENST00000258349 R4GN57 208 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 IGKV3-7A0A075B6H7 116 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 FAM181BA6NEQ2 426 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 NPIPB11E5RHQ5 1161 aa4.1□□□□□ -1.75
RC3H1-201ENST00000258349 RECKO95980 971 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms