RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 FAM209BQ5JX69 171 aa9.86□□□□□ -0.83
VPREB3-201ENST00000248948 DMBX1Q8NFW5 382 aa9.86□□□□□ -0.83
VPREB3-201ENST00000248948 HRASLSQ9HDD0 168 aa9.86□□□□□ -0.83
VPREB3-201ENST00000248948 RSL24D1Q9UHA3 163 aaKnown RBP9.86□□□□□ -0.83
VPREB3-201ENST00000248948 CCDC160A6NGH7 325 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 UPK2O00526 184 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 OVOL1O14753 267 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 GSTZ1O43708 216 aaPredicted RBP9.85□□□□□ -0.83
VPREB3-201ENST00000248948 RAB3DO95716 219 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 DHFRP00374 187 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 APELAP0DMC3 54 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 ZP3P21754 424 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 PTBP1P26599 531 aaKnown RBP eCLIP9.85□□□□□ -0.83
VPREB3-201ENST00000248948 HOXD3P31249 432 aaPredicted RBP9.85□□□□□ -0.83
VPREB3-201ENST00000248948 ECI1P42126 302 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 STEAP1BQ6NZ63 245 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 ZNF343Q6P1L6 599 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 TBC1D26Q86UD7 250 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 NECAP1Q8NC96 275 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 MRAPQ8TCY5 172 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 COMMD5Q9GZQ3 224 aa9.85□□□□□ -0.83
VPREB3-201ENST00000248948 RANGRFQ9HD47 186 aaPredicted RBP9.85□□□□□ -0.83
VPREB3-201ENST00000248948 A0A1B0GW64 132 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 DPPA5A6NC42 116 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 H0Y980 276 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 PRB2P02812 416 aaPredicted RBP9.84□□□□□ -0.83
VPREB3-201ENST00000248948 CRYGCP07315 174 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 SLURP1P55000 103 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 OR2B8PP59922 312 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 KRTAP10-11P60412 298 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 RHOGP84095 191 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 ZNF45Q02386 682 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 DCTN2Q13561 401 aaKnown RBP9.84□□□□□ -0.83
VPREB3-201ENST00000248948 KLK9Q2XQG4 91 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 ZNF585BQ52M93 769 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 HSD17B13Q7Z5P4 300 aaPredicted RBP9.84□□□□□ -0.83
VPREB3-201ENST00000248948 FYTTD1Q96QD9 318 aaKnown RBP9.84□□□□□ -0.83
VPREB3-201ENST00000248948 TSC22D3Q99576 134 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 KLK9Q9UKQ9 250 aa9.84□□□□□ -0.83
VPREB3-201ENST00000248948 IGLC7A0M8Q6 106 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 HMX3A6NHT5 357 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 CGB1A6NKQ9 187 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 E7EUB6 86 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 AKAIN1P0CW23 69 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 PGAM2P15259 253 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 RPA2P15927 270 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 CTRB1P17538 263 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 PSMB6P28072 239 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 LPAR6P43657 344 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 PPP5CP53041 499 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 DEFA5Q01523 94 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 EXOSC2Q13868 293 aaKnown RBP9.83□□□□□ -0.84
VPREB3-201ENST00000248948 SURF2Q15527 256 aaPredicted RBP9.83□□□□□ -0.84
VPREB3-201ENST00000248948 CTRB2Q6GPI1 263 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 ZNF429Q86V71 674 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 CCDC71LQ8N9Z2 235 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 OR4D10Q8NGI6 311 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 TERB2Q8NHR7 220 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 DCUN1D4Q92564 292 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 DLX4Q92988 240 aaPredicted RBP9.83□□□□□ -0.84
VPREB3-201ENST00000248948 QTRT1Q9BXR0 403 aaKnown RBP9.83□□□□□ -0.84
VPREB3-201ENST00000248948 AKIP1Q9NQ31 210 aa9.83□□□□□ -0.84
VPREB3-201ENST00000248948 PEF1Q9UBV8 284 aaKnown RBP9.83□□□□□ -0.84
VPREB3-201ENST00000248948 TRAV3A0A0B4J244 114 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 C15orf61A6NNL5 157 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 DISC1C4P0D8 188 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 RBMXL2O75526 392 aaKnown RBP9.82□□□□□ -0.84
VPREB3-201ENST00000248948 B3GALNT1O75752 331 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 KRASP01116 189 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 AREGP15514 252 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 HIST1H1BP16401 226 aaKnown RBP9.82□□□□□ -0.84
VPREB3-201ENST00000248948 TNFSF8P32971 234 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 G6PCP35575 357 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 PIGPP57054 158 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 C15orf32Q32M92 178 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 SCGB2B2Q4G0G5 96 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 ACSM6Q6P461 480 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 OR4C16Q8NGL9 310 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 OR5B3Q8NH48 314 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 ZFAND1Q8TCF1 268 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 PRRT1Q99946 306 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 SOSTQ9BQB4 213 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 SLC2A8Q9NY64 477 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 PRNDQ9UKY0 176 aa9.82□□□□□ -0.84
VPREB3-201ENST00000248948 ANKRD20A5PA0PJZ0 165 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 FABP12A6NFH5 140 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 K7EIL1 84 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 CYB5BO43169 146 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 SNAPC5O75971 98 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 PRH1P02810 166 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 CTSDP07339 412 aaPredicted RBP9.81□□□□□ -0.84
VPREB3-201ENST00000248948 MYOD1P15172 320 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 S100A5P33763 92 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 ATP5G2Q06055 141 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 OR1L8Q8NGR8 309 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 OR13C8Q8NGS7 320 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 LSM10Q969L4 123 aaKnown RBP9.81□□□□□ -0.84
VPREB3-201ENST00000248948 MRGPRFQ96AM1 343 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 SEC22AQ96IW7 307 aa9.81□□□□□ -0.84
VPREB3-201ENST00000248948 FKBP11Q9NYL4 201 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms